AutismKB 2.0

Annotation Detail for BTG3


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Basic Information Top
Gene Symbol:BTG3 ( ANA,MGC8928,TOB5,TOB55,TOFA )
Gene Full Name: BTG family, member 3
Band: 21q21.1
Quick LinksEntrez ID:10950; OMIM: 605674; Uniprot ID:BTG3_HUMAN; ENSEMBL ID: ENSG00000154640; HGNC ID: 1132
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst2 / 6231932
fetus31 / 56401254
neonate0 / 310970 
infant6 / 23620254
juvenile1 / 5555617
adult89 / 193912145
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma2 / 17475114
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma9 / 82823108
colorectal tumor5 / 11424643
esophageal tumor0 / 172900 
gastrointestinal tumor8 / 11936967
germ cell tumor12 / 26384545
glioma2 / 10688318
head and neck tumor5 / 13630236
kidney tumor1 / 6895914
leukemia4 / 9584241
liver tumor6 / 9635962
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia4 / 9725041
normal134 / 336030739
ovarian tumor4 / 7668252
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS14 / 125680111
prostate cancer1 / 1026809
retinoblastoma1 / 4635621
skin tumor6 / 12494948
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor5 / 9025755
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites3 / 4001574
bladder0 / 297570 
blood5 / 12347840
bone6 / 7165583
bone marrow0 / 488010 
brain30 / 110098927
cervix2 / 4817141
connective tissue4 / 14925526
ear4 / 16212246
embryonic tissue10 / 21572246
esophagus0 / 202090 
eye12 / 21105456
heart6 / 8962666
intestine10 / 23447242
kidney12 / 21177756
larynx2 / 2414582
liver10 / 20774348
lung15 / 33697444
lymph0 / 442700 
lymph node3 / 9161032
mammary gland0 / 1532710 
mouth0 / 670520 
muscle2 / 10771518
nerve1 / 1576863
ovary5 / 10205148
pancreas19 / 21481288
parathyroid1 / 2053948
pharynx3 / 4132872
pituitary gland1 / 1658560
placenta26 / 28082592
prostate2 / 18934510
salivary gland0 / 201550 
skin13 / 21057461
spleen0 / 539520 
stomach5 / 9661951
testis15 / 33044245
thymus3 / 8113136
thyroid1 / 4747321
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus9 / 23287838
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205548_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts80.75
Adipocyte19.4
AdrenalCortex25.9
Adrenalgland17.15
Amygdala21.35
Appendix25.5
AtrioventricularNode6.1
BDCA4+_DentriticCells48.6
Bonemarrow13.95
BronchialEpithelialCells174.35
CD105+_Endothelial115.95
CD14+_Monocytes8.2
CD19+_BCells(neg._sel.)22.55
CD33+_Myeloid18.6
CD34+54.2
CD4+_Tcells15.8
CD56+_NKCells38.3
CD71+_EarlyErythroid497.65
CD8+_Tcells11.75
CardiacMyocytes31.05
Caudatenucleus12.55
Cerebellum7.5
CerebellumPeduncles7.65
CiliaryGanglion5.85
CingulateCortex5.65
Colorectaladenocarcinoma84.1
DorsalRootGanglion6.8
FetalThyroid48.6
Fetalbrain31.45
Fetalliver66.7
Fetallung188.7
GlobusPallidus5.55
Heart6.7
Hypothalamus23.75
Kidney15.85
Leukemia_chronicMyelogenousK-56251.65
Leukemia_promyelocytic-HL-60136.8
Leukemialymphoblastic(MOLT-4)57.35
Liver8.55
Lung92.1
Lymphnode13.95
Lymphoma_burkitts(Daudi)63.95
Lymphoma_burkitts(Raji)73.1
MedullaOblongata10.95
OccipitalLobe6.6
OlfactoryBulb20.3
Ovary38.9
Pancreas21.8
PancreaticIslet126.55
ParietalLobe7.35
Pituitary87.9
Placenta83.3
Pons11.65
PrefrontalCortex8.45
Prostate46.1
Salivarygland42.6
SkeletalMuscle26.65
Skin35.15
SmoothMuscle159.25
Spinalcord28.55
SubthalamicNucleus8.75
SuperiorCervicalGanglion13.5
TemporalLobe6.45
Testis97.35
TestisGermCell163.4
TestisIntersitial86.15
TestisLeydigCell98.5
TestisSeminiferousTubule132.05
Thalamus10.45
Thymus26.3
Thyroid86.55
Tongue20
Tonsil16.1
Trachea28.65
TrigeminalGanglion26.05
Uterus145.05
UterusCorpus126.85
WholeBlood8.5
Wholebrain10.25
colon53.1
pineal_day36.68
pineal_night43.6
retina40.075
small_intestine16.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_15890_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.6 ± 0.33
Basal Forebrain5.8 ± 0.52
Basal Part of Pons4.71 ± 0.41
Cerebellar Cortex4.67 ± 0.38
Cerebellar Nuclei5.04 ± 0.51
Claustrum5.46 ± 0.46
Epithalamus6.16 ± 0.64
Frontal Lobe5.18 ± 0.76
Globus Pallidus6.25 ± 0.31
Hypothalamus6.24 ± 0.5
Insula5.83 ± 0.46
Limbic Lobe5.47 ± 0.67
Mesencephalon5.35 ± 0.77
Myelencephalon5.34 ± 0.7
Occipital Lobe5.43 ± 0.46
Parietal Lobe5.09 ± 0.61
Pontine Tegmentum5.58 ± 0.57
Striatum6.19 ± 0.43
Subthalamus4.84 ± 0.24
Temporal Lobe5.46 ± 0.5
Thalamus4.91 ± 0.62
White Matter7.21 ± 0.48
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Btg3CBCerebellum2.18
2.36
Btg3CTXCerebral cortex16.64
12.1
Btg3HIPHippocampal region27.48
28.64
Btg3HPFHippocampal formation27.06
26
Btg3HYHypothalamus6.08
4.72
Btg3LSXLateral septal complex6.36
4.02
Btg3MBMidbrain2.61
2.32
Btg3MYMedulla1.54
1.19
Btg3OLFOlfactory bulb22.49
16.9
Btg3PPons1.38
1.41
Btg3PALPallidum8.7
7.12
Btg3RHPRetrohippocampal region25.97
22.02
Btg3sAMYStriatum-like amygdalar nuclei21.34
16.08
Btg3STRStriatum28.83
19.46
Btg3STRdStriatum dorsal region29.15
19.83
Btg3STRvStriatum ventral region40.89
24.77
Btg3THThalamus1.28
1.31
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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