AutismKB 2.0

Annotation Detail for STIP1


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Basic Information Top
Gene Symbol:STIP1 ( HOP,IEF-SSP-3521,P60,STI1,STI1L )
Gene Full Name: stress-induced-phosphoprotein 1
Band: 11q13.1
Quick LinksEntrez ID:10963; OMIM: 605063; Uniprot ID:STIP1_HUMAN; ENSEMBL ID: ENSG00000168439; HGNC ID: 11387
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body8 / 70761113
blastocyst13 / 62319208
fetus53 / 56401293
neonate2 / 3109764
infant9 / 23620381
juvenile24 / 55556431
adult324 / 1939121167
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma1 / 1747557
breast (mammary gland) tumor33 / 94178350
cervical tumor10 / 34366290
chondrosarcoma16 / 82823193
colorectal tumor58 / 114246507
esophageal tumor2 / 17290115
gastrointestinal tumor93 / 119369779
germ cell tumor92 / 263845348
glioma19 / 106883177
head and neck tumor21 / 136302154
kidney tumor16 / 68959232
leukemia11 / 95842114
liver tumor14 / 96359145
lung tumor34 / 103127329
lymphoma14 / 71755195
non-neoplasia10 / 97250102
normal334 / 336030799
ovarian tumor9 / 76682117
pancreatic tumor17 / 104616162
primitive neuroectodermal tumor of the CNS58 / 125680461
prostate cancer16 / 102680155
retinoblastoma15 / 46356323
skin tumor43 / 124949344
soft tissue/muscle tissue tumor32 / 125191255
uterine tumor12 / 90257132
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland8 / 33197240
ascites59 / 400151474
bladder6 / 29757201
blood19 / 123478153
bone12 / 71655167
bone marrow8 / 48801163
brain143 / 1100989129
cervix10 / 48171207
connective tissue12 / 14925580
ear0 / 162120 
embryonic tissue44 / 215722203
esophagus3 / 20209148
eye34 / 211054161
heart7 / 8962678
intestine80 / 234472341
kidney26 / 211777122
larynx3 / 24145124
liver18 / 20774386
lung51 / 336974151
lymph7 / 44270158
lymph node8 / 9161087
mammary gland40 / 153271260
mouth11 / 67052164
muscle13 / 107715120
nerve1 / 1576863
ovary20 / 102051195
pancreas17 / 21481279
parathyroid0 / 205390 
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta37 / 280825131
prostate23 / 189345121
salivary gland1 / 2015549
skin48 / 210574227
spleen5 / 5395292
stomach33 / 96619341
testis44 / 330442133
thymus7 / 8113186
thyroid7 / 47473147
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus46 / 232878197
vascular6 / 51780115
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213330_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts969.45
Adipocyte73.15
AdrenalCortex171.6
Adrenalgland188.85
Amygdala41.55
Appendix62.8
AtrioventricularNode82.1
BDCA4+_DentriticCells288.1
Bonemarrow122.6
BronchialEpithelialCells197.25
CD105+_Endothelial348.85
CD14+_Monocytes204.95
CD19+_BCells(neg._sel.)106.45
CD33+_Myeloid223.8
CD34+478.35
CD4+_Tcells284.2
CD56+_NKCells298.25
CD71+_EarlyErythroid334.15
CD8+_Tcells269.05
CardiacMyocytes263.8
Caudatenucleus100.7
Cerebellum254.95
CerebellumPeduncles281.7
CiliaryGanglion53.35
CingulateCortex149.1
Colorectaladenocarcinoma379.85
DorsalRootGanglion65
FetalThyroid82.2
Fetalbrain185.95
Fetalliver49.75
Fetallung65.9
GlobusPallidus96.95
Heart97.4
Hypothalamus184.25
Kidney99.2
Leukemia_chronicMyelogenousK-562320
Leukemia_promyelocytic-HL-60142
Leukemialymphoblastic(MOLT-4)248.5
Liver193.6
Lung77.75
Lymphnode102.8
Lymphoma_burkitts(Daudi)254.15
Lymphoma_burkitts(Raji)115.05
MedullaOblongata132
OccipitalLobe175.9
OlfactoryBulb199
Ovary34.05
Pancreas85.05
PancreaticIslet120.1
ParietalLobe187.4
Pituitary118.85
Placenta177.55
Pons103.15
PrefrontalCortex243.65
Prostate250.75
Salivarygland70.3
SkeletalMuscle96.2
Skin62.7
SmoothMuscle272.3
Spinalcord106.65
SubthalamicNucleus110.55
SuperiorCervicalGanglion54.7
TemporalLobe134.2
Testis186.3
TestisGermCell377.7
TestisIntersitial491.8
TestisLeydigCell221.95
TestisSeminiferousTubule301.95
Thalamus265.7
Thymus144.7
Thyroid82.6
Tongue51.2
Tonsil109.15
Trachea85.25
TrigeminalGanglion58.8
Uterus114.9
UterusCorpus39.7
WholeBlood68.9
Wholebrain254.05
colon89.5
pineal_day339.36
pineal_night363.68
retina188.475
small_intestine109.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P327815
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.74 ± 0.46
Basal Forebrain4.86 ± 0.5
Basal Part of Pons5.44 ± 0.25
Cerebellar Cortex5.21 ± 0.45
Cerebellar Nuclei5.54 ± 0.42
Claustrum4.79 ± 0.47
Epithalamus5.12 ± 0.43
Frontal Lobe5.11 ± 0.44
Globus Pallidus4.68 ± 0.53
Hypothalamus5.15 ± 0.51
Insula5.11 ± 0.35
Limbic Lobe5.09 ± 0.39
Mesencephalon4.93 ± 0.46
Myelencephalon4.98 ± 0.51
Occipital Lobe4.74 ± 0.39
Parietal Lobe5.02 ± 0.39
Pontine Tegmentum5 ± 0.4
Striatum4.71 ± 0.31
Subthalamus5.35 ± 0.64
Temporal Lobe5.07 ± 0.41
Thalamus4.96 ± 0.32
White Matter5.24 ± 0.28
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Stip1CBCerebellum98.12
100
Stip1CTXCerebral cortex100
100
Stip1HIPHippocampal region100
100
Stip1HPFHippocampal formation100
100
Stip1HYHypothalamus100
100
Stip1LSXLateral septal complex100
100
Stip1MBMidbrain100
100
Stip1MYMedulla100
100
Stip1OLFOlfactory bulb100
100
Stip1PPons100
100
Stip1PALPallidum100
100
Stip1RHPRetrohippocampal region100
100
Stip1sAMYStriatum-like amygdalar nuclei100
100
Stip1STRStriatum100
100
Stip1STRdStriatum dorsal region100
100
Stip1STRvStriatum ventral region100
100
Stip1THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00000518 9 454 462 ALDLDSSCK Peptide Atlas
STIP1_HUMAN_1 10 1 10 MEQVNELKEK PRIDE
STIP1_HUMAN_1 8 1 8 MEQVNELK PRIDE
STIP1_HUMAN_110 9 110 118 EGLQNMEAR PRIDE
STIP1_HUMAN_13 19 13 31 ALSVGNIDDALQCYSEAIK PRIDE
STIP1_HUMAN_13 31 13 43 ALSVGNIDDALQCYSEAIKLDPHNHVLYSNR PRIDE
STIP1_HUMAN_144 16 144 159 TLLSDPTYRELIEQLR PRIDE
STIP1_HUMAN_144 9 144 152 TLLSDPTYR PRIDE
STIP1_HUMAN_207 16 207 222 ETKPEPMEEDLPENKK PRIDE
STIP1_HUMAN_207 16 207 222 KETKPEPMEEDLPENK PRIDE
STIP1_HUMAN_208 15 208 222 ETKPEPMEEDLPENK PRIDE
STIP1_HUMAN_253 20 253 272 ELDPTNMTYITNQAAVYFEK PRIDE
STIP1_HUMAN_281 10 281 290 LCEKAIEVGR PRIDE
STIP1_HUMAN_298 8 298 305 QIAKAYAR PRIDE
STIP1_HUMAN_32 12 32 43 LDPHNHVLYSNR PRIDE
STIP1_HUMAN_332 20 332 351 TPDVLKKCQQAEKILKEQER PRIDE
STIP1_HUMAN_335 17 335 351 VLKKCQQAEKILKEQER PRIDE
STIP1_HUMAN_351 13 351 363 LAYINPDLALEEK PRIDE
STIP1_HUMAN_352 13 352 364 LAYINPDLALEEK PRIDE
STIP1_HUMAN_391 10 391 400 PKDAKLYSNR PRIDE
STIP1_HUMAN_453 17 453 469 ALDLDSSCKEAADGYQR PRIDE
STIP1_HUMAN_471 8 471 478 CMMAQYNR PRIDE
STIP1_HUMAN_488 17 488 504 AMADPEVQQIMSDPAMR PRIDE
STIP1_HUMAN_489 17 489 505 AMADPEVQQIMSDPAMR PRIDE
STIP1_HUMAN_490 16 490 505 MADPEVQQIMSDPAMR PRIDE
STIP1_HUMAN_493 13 493 505 PEVQQIMSDPAMR PRIDE
STIP1_HUMAN_505 25 505 529 LILEQMQKDPQALSEHLKNPVIAQK PRIDE
STIP1_HUMAN_506 8 506 513 LILEQMQK PRIDE
STIP1_HUMAN_533 10 533 542 LMDVGLIAIR PRIDE
STIP1_HUMAN_534 10 534 543 LMDVGLIAIR PRIDE
STIP1_HUMAN_78 10 78 87 KAAALEFLNR PRIDE
STIP1_HUMAN_93 16 93 108 TYEEGLKHEANNPQLK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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