AutismKB 2.0

Annotation Detail for IFI44L


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Basic Information Top
Gene Symbol:IFI44L ( C1orf29 )
Gene Full Name: interferon-induced protein 44-like
Band: 1p31.1
Quick LinksEntrez ID:10964; OMIM: NA; Uniprot ID:IF44L_HUMAN; ENSEMBL ID: ENSG00000137959; HGNC ID: 17817
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus13 / 56401223
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult73 / 193912137
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor7 / 9417874
cervical tumor2 / 3436658
chondrosarcoma5 / 8282360
colorectal tumor2 / 11424617
esophageal tumor1 / 1729057
gastrointestinal tumor2 / 11936916
germ cell tumor3 / 26384511
glioma7 / 10688365
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor2 / 9635920
lung tumor2 / 10312719
lymphoma1 / 7175513
non-neoplasia5 / 9725051
normal119 / 336030735
ovarian tumor1 / 7668213
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor22 / 125191175
uterine tumor8 / 9025788
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland2 / 3319760
ascites0 / 400150 
bladder10 / 29757336
blood8 / 12347864
bone4 / 7165555
bone marrow1 / 4880120
brain35 / 110098931
cervix2 / 4817141
connective tissue12 / 14925580
ear1 / 1621261
embryonic tissue1 / 2157224
esophagus1 / 2020949
eye3 / 21105414
heart2 / 8962622
intestine6 / 23447225
kidney2 / 2117779
larynx1 / 2414541
liver3 / 20774314
lung9 / 33697426
lymph1 / 4427022
lymph node2 / 9161021
mammary gland13 / 15327184
mouth0 / 670520 
muscle2 / 10771518
nerve0 / 157680 
ovary2 / 10205119
pancreas3 / 21481213
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta7 / 28082524
prostate1 / 1893455
salivary gland0 / 201550 
skin1 / 2105744
spleen15 / 53952278
stomach2 / 9661920
testis3 / 3304429
thymus9 / 81131110
thyroid1 / 4747321
tonsil0 / 169990 
trachea4 / 5241376
umbilical cord0 / 136800 
uterus29 / 232878124
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204439_at
Cell line Expression level Expression bar
721_B_lymphoblasts347.8
Adipocyte4.25
AdrenalCortex4.7
Adrenalgland3.7
Amygdala5
Appendix5
AtrioventricularNode3.7
BDCA4+_DentriticCells44.05
Bonemarrow4.3
BronchialEpithelialCells4.15
CD105+_Endothelial4.15
CD14+_Monocytes6.15
CD19+_BCells(neg._sel.)4.7
CD33+_Myeloid72.05
CD34+5.15
CD4+_Tcells5.3
CD56+_NKCells5.05
CD71+_EarlyErythroid4.05
CD8+_Tcells4.8
CardiacMyocytes5.6
Caudatenucleus3.9
Cerebellum3.5
CerebellumPeduncles4.9
CiliaryGanglion5.05
CingulateCortex4.75
Colorectaladenocarcinoma4.2
DorsalRootGanglion3.65
FetalThyroid4.2
Fetalbrain4.05
Fetalliver3.8
Fetallung3.4
GlobusPallidus3.85
Heart5.6
Hypothalamus9.2
Kidney3.55
Leukemia_chronicMyelogenousK-5623.75
Leukemia_promyelocytic-HL-603.7
Leukemialymphoblastic(MOLT-4)3.25
Liver5.8
Lung4.7
Lymphnode10.05
Lymphoma_burkitts(Daudi)46.95
Lymphoma_burkitts(Raji)6.1
MedullaOblongata4.2
OccipitalLobe3.9
OlfactoryBulb9.15
Ovary3.05
Pancreas3.6
PancreaticIslet4.6
ParietalLobe4.8
Pituitary5.05
Placenta4.3
Pons4.3
PrefrontalCortex8.65
Prostate5.05
Salivarygland3.5
SkeletalMuscle5.7
Skin3.6
SmoothMuscle4.85
Spinalcord4.5
SubthalamicNucleus4.1
SuperiorCervicalGanglion5
TemporalLobe4.1
Testis3.65
TestisGermCell3.7
TestisIntersitial3.55
TestisLeydigCell4.3
TestisSeminiferousTubule3.75
Thalamus5.85
Thymus3.95
Thyroid5.5
Tongue4.3
Tonsil139.15
Trachea3.7
TrigeminalGanglion4.55
Uterus3.6
UterusCorpus3.95
WholeBlood4.75
Wholebrain3.5
colon4.25
pineal_day5.24
pineal_night5.18
retina6.15
small_intestine4.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5791_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.95 ± 0.75
Basal Forebrain4.82 ± 0.2
Basal Part of Pons3.97 ± 0.29
Cerebellar Cortex3.94 ± 0.45
Cerebellar Nuclei4.95 ± 0.48
Claustrum4.08 ± 0.92
Epithalamus5.55 ± 0.63
Frontal Lobe4.35 ± 0.78
Globus Pallidus6.23 ± 0.32
Hypothalamus4.43 ± 1.08
Insula4.23 ± 0.43
Limbic Lobe4.1 ± 0.8
Mesencephalon4.6 ± 0.69
Myelencephalon4.75 ± 0.81
Occipital Lobe5 ± 0.74
Parietal Lobe4.19 ± 0.65
Pontine Tegmentum4.53 ± 0.91
Striatum5.52 ± 0.5
Subthalamus4.64 ± 0.35
Temporal Lobe4.39 ± 0.63
Thalamus4.89 ± 0.58
White Matter5.06 ± 0.85
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
H28CBCerebellum0.47
1.54
H28CTXCerebral cortex0.29
0.41
H28HIPHippocampal region0.26
0.62
H28HPFHippocampal formation0.25
0.49
H28HYHypothalamus2.19
2.68
H28LSXLateral septal complex0.29
0.49
H28MBMidbrain0.1
0.14
H28MYMedulla0.18
0.36
H28OLFOlfactory bulb0.18
0.32
H28PPons0.27
0.42
H28PALPallidum0.93
1.22
H28RHPRetrohippocampal region0.21
0.27
H28sAMYStriatum-like amygdalar nuclei0.11
0.12
H28STRStriatum0.13
0.17
H28STRdStriatum dorsal region0.12
0.13
H28STRvStriatum ventral region0.06
0.19
H28THThalamus1.14
1.52
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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