AutismKB 2.0

Annotation Detail for GLIPR1


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Basic Information Top
Gene Symbol:GLIPR1 ( CRISP7,GLIPR,RTVP1 )
Gene Full Name: GLI pathogenesis-related 1
Band: 12q21.2
Quick LinksEntrez ID:11010; OMIM: 602692; Uniprot ID:GLIP1_HUMAN; ENSEMBL ID: ENSG00000139278; HGNC ID: 17001
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst0 / 623190 
fetus20 / 56401235
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult121 / 193912162
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma2 / 17475114
breast (mammary gland) tumor0 / 941780 
cervical tumor2 / 3436658
chondrosarcoma18 / 82823217
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor5 / 26384518
glioma10 / 10688393
head and neck tumor1 / 1363027
kidney tumor5 / 6895972
leukemia7 / 9584273
liver tumor9 / 9635993
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia4 / 9725041
normal181 / 336030753
ovarian tumor3 / 7668239
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer7 / 10268068
retinoblastoma0 / 463560 
skin tumor2 / 12494916
soft tissue/muscle tissue tumor6 / 12519147
uterine tumor32 / 90257354
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites0 / 400150 
bladder2 / 2975767
blood3 / 12347824
bone16 / 71655223
bone marrow8 / 48801163
brain44 / 110098939
cervix2 / 4817141
connective tissue12 / 14925580
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye6 / 21105428
heart4 / 8962644
intestine2 / 2344728
kidney22 / 211777103
larynx0 / 241450 
liver11 / 20774352
lung22 / 33697465
lymph0 / 442700 
lymph node13 / 91610141
mammary gland3 / 15327119
mouth2 / 6705229
muscle0 / 1077150 
nerve0 / 157680 
ovary4 / 10205139
pancreas13 / 21481260
parathyroid0 / 205390 
pharynx3 / 4132872
pituitary gland1 / 1658560
placenta14 / 28082549
prostate13 / 18934568
salivary gland0 / 201550 
skin19 / 21057490
spleen0 / 539520 
stomach3 / 9661931
testis3 / 3304429
thymus3 / 8113136
thyroid2 / 4747342
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus43 / 232878184
vascular18 / 51780347
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204222_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.95
Adipocyte50
AdrenalCortex6.9
Adrenalgland5.4
Amygdala6.35
Appendix6.65
AtrioventricularNode4.8
BDCA4+_DentriticCells451.2
Bonemarrow7.4
BronchialEpithelialCells36.45
CD105+_Endothelial6.6
CD14+_Monocytes737.35
CD19+_BCells(neg._sel.)170.5
CD33+_Myeloid652.5
CD34+38.5
CD4+_Tcells25.6
CD56+_NKCells143.55
CD71+_EarlyErythroid6.05
CD8+_Tcells29.35
CardiacMyocytes74.95
Caudatenucleus5.55
Cerebellum5
CerebellumPeduncles8.45
CiliaryGanglion4.4
CingulateCortex6.55
Colorectaladenocarcinoma6.15
DorsalRootGanglion4.8
FetalThyroid6
Fetalbrain6.1
Fetalliver5.45
Fetallung5.2
GlobusPallidus4.7
Heart8.1
Hypothalamus7.05
Kidney5.3
Leukemia_chronicMyelogenousK-5625.3
Leukemia_promyelocytic-HL-605.4
Leukemialymphoblastic(MOLT-4)4.65
Liver8.6
Lung7.1
Lymphnode11.8
Lymphoma_burkitts(Daudi)8.85
Lymphoma_burkitts(Raji)8.85
MedullaOblongata6.9
OccipitalLobe5.55
OlfactoryBulb4.95
Ovary6.25
Pancreas8.1
PancreaticIslet7.6
ParietalLobe6.9
Pituitary7.3
Placenta6.85
Pons6.05
PrefrontalCortex7.65
Prostate6.8
Salivarygland7.85
SkeletalMuscle11.35
Skin4.8
SmoothMuscle650
Spinalcord6.7
SubthalamicNucleus5.7
SuperiorCervicalGanglion7.65
TemporalLobe5.85
Testis5.55
TestisGermCell5.45
TestisIntersitial5.55
TestisLeydigCell6.3
TestisSeminiferousTubule5.4
Thalamus6.45
Thymus5.1
Thyroid7.3
Tongue6.25
Tonsil6.9
Trachea5.6
TrigeminalGanglion7.3
Uterus8.65
UterusCorpus7.25
WholeBlood362.7
Wholebrain5.1
colon6.45
pineal_day7.42
pineal_night7.12
retina7.6
small_intestine6.15
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Glipr1CBCerebellum1.15
1.78
Glipr1CTXCerebral cortex2.94
2.64
Glipr1HIPHippocampal region3.99
5.45
Glipr1HPFHippocampal formation3.12
3.57
Glipr1HYHypothalamus1.8
1.5
Glipr1LSXLateral septal complex0.14
0.25
Glipr1MBMidbrain0.46
0.69
Glipr1MYMedulla1.85
2.94
Glipr1OLFOlfactory bulb0.88
0.84
Glipr1PPons1.19
1.56
Glipr1PALPallidum0.4
0.35
Glipr1RHPRetrohippocampal region2.12
1.59
Glipr1sAMYStriatum-like amygdalar nuclei3.24
2.49
Glipr1STRStriatum0.55
0.49
Glipr1STRdStriatum dorsal region0.31
0.3
Glipr1STRvStriatum ventral region0.1
0.21
Glipr1THThalamus1.03
0.98
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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