AutismKB 2.0

Annotation Detail for LILRA3


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:LILRA3 ( CD85E,HM31,HM43,ILT6,LIR-4,LIR4,e3 )
Gene Full Name: leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3
Band: 19q13.4 alternate reference locus
Quick LinksEntrez ID:11026; OMIM: 604818; Uniprot ID:LIRA3_HUMAN; ENSEMBL ID: ENSG00000170866; HGNC ID: 6604
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult12 / 19391216
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor2 / 2638457
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia9 / 9584293
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal3 / 33603070 
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood11 / 12347889
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx1 / 2414541
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen1 / 5395218
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206881_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.5
Adipocyte4.5
AdrenalCortex5.35
Adrenalgland3.9
Amygdala4.7
Appendix5.15
AtrioventricularNode3.75
BDCA4+_DentriticCells9
Bonemarrow11.35
BronchialEpithelialCells4.45
CD105+_Endothelial4.6
CD14+_Monocytes1111.05
CD19+_BCells(neg._sel.)4.8
CD33+_Myeloid404.7
CD34+5.65
CD4+_Tcells4.85
CD56+_NKCells9.45
CD71+_EarlyErythroid4.3
CD8+_Tcells4.3
CardiacMyocytes6.3
Caudatenucleus4.1
Cerebellum3.7
CerebellumPeduncles5.3
CiliaryGanglion3.45
CingulateCortex4.95
Colorectaladenocarcinoma4.55
DorsalRootGanglion3.75
FetalThyroid4.4
Fetalbrain4.45
Fetalliver4
Fetallung10.75
GlobusPallidus3.4
Heart6.2
Hypothalamus4.9
Kidney3.9
Leukemia_chronicMyelogenousK-5624.15
Leukemia_promyelocytic-HL-604.05
Leukemialymphoblastic(MOLT-4)3.6
Liver7.1
Lung5.05
Lymphnode3.9
Lymphoma_burkitts(Daudi)5.95
Lymphoma_burkitts(Raji)6.65
MedullaOblongata4.1
OccipitalLobe4.1
OlfactoryBulb3.55
Ovary5.2
Pancreas3.75
PancreaticIslet5.05
ParietalLobe4.95
Pituitary5.3
Placenta4.6
Pons4.6
PrefrontalCortex5.6
Prostate5.25
Salivarygland3.9
SkeletalMuscle5.8
Skin4.35
SmoothMuscle5.15
Spinalcord4.9
SubthalamicNucleus4.3
SuperiorCervicalGanglion5.5
TemporalLobe5.05
Testis3.9
TestisGermCell3.85
TestisIntersitial3.85
TestisLeydigCell4.55
TestisSeminiferousTubule3.9
Thalamus4.7
Thymus3.55
Thyroid5.6
Tongue4.75
Tonsil4.5
Trachea3.8
TrigeminalGanglion6.9
Uterus3.7
UterusCorpus4.2
WholeBlood135.2
Wholebrain3.75
colon4.55
pineal_day5.62
pineal_night5.5
retina5.475
small_intestine4.35
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P79094
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.74 ± 1
Basal Forebrain3.16 ± 0.45
Basal Part of Pons3.3 ± 0.64
Cerebellar Cortex2.58 ± 0.48
Cerebellar Nuclei3.7 ± 0.44
Claustrum3.72 ± 0.82
Epithalamus3.22 ± 0.48
Frontal Lobe2.99 ± 0.73
Globus Pallidus4.69 ± 0.48
Hypothalamus2.85 ± 0.87
Insula2.78 ± 0.62
Limbic Lobe3.18 ± 0.74
Mesencephalon3.17 ± 0.91
Myelencephalon3.27 ± 0.69
Occipital Lobe3.15 ± 0.8
Parietal Lobe3.14 ± 0.81
Pontine Tegmentum3.01 ± 0.8
Striatum3.53 ± 0.64
Subthalamus2.94 ± 0.56
Temporal Lobe3.13 ± 0.76
Thalamus3.24 ± 0.65
White Matter4.54 ± 0.63
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00039206 19 378 396 YQAEFPMSPVTSAHAGTYR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved