AutismKB 2.0

Annotation Detail for LILRA2


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Basic Information Top
Gene Symbol:LILRA2 ( CD85H,ILT1,LIR-7,LIR7 )
Gene Full Name: leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2
Band: 19q13.4
Quick LinksEntrez ID:11027; OMIM: 604812; Uniprot ID:LIRA2_HUMAN; ENSEMBL ID: ENSG00000104972,ENSG00000239998; HGNC ID: 6603
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult18 / 19391219
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor3 / 26384511
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia4 / 9584241
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal41 / 336030712
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood10 / 12347880
bone0 / 716550 
bone marrow2 / 4880140
brain8 / 11009897
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney2 / 2117779
larynx0 / 241450 
liver0 / 2077430 
lung2 / 3369745
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen6 / 53952111
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 211102_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts5
Adipocyte4
AdrenalCortex4.45
Adrenalgland3.4
Amygdala4.2
Appendix4.15
AtrioventricularNode3.3
BDCA4+_DentriticCells20.3
Bonemarrow8.5
BronchialEpithelialCells3.95
CD105+_Endothelial4.4
CD14+_Monocytes139.55
CD19+_BCells(neg._sel.)4.35
CD33+_Myeloid144.95
CD34+7.15
CD4+_Tcells4.4
CD56+_NKCells4.85
CD71+_EarlyErythroid3.85
CD8+_Tcells3.9
CardiacMyocytes5.4
Caudatenucleus3.85
Cerebellum3.3
CerebellumPeduncles4.65
CiliaryGanglion5.75
CingulateCortex4.25
Colorectaladenocarcinoma4.05
DorsalRootGanglion3.4
FetalThyroid3.95
Fetalbrain4.05
Fetalliver3.55
Fetallung3.3
GlobusPallidus3.05
Heart5.2
Hypothalamus4.4
Kidney3.4
Leukemia_chronicMyelogenousK-5623.7
Leukemia_promyelocytic-HL-603.6
Leukemialymphoblastic(MOLT-4)3.25
Liver5.45
Lung4.4
Lymphnode3.45
Lymphoma_burkitts(Daudi)5.25
Lymphoma_burkitts(Raji)5.7
MedullaOblongata3.7
OccipitalLobe3.6
OlfactoryBulb3.2
Ovary2.8
Pancreas3.35
PancreaticIslet4.35
ParietalLobe4.45
Pituitary4.75
Placenta4.15
Pons3.9
PrefrontalCortex5
Prostate4.7
Salivarygland3.25
SkeletalMuscle4.75
Skin3.25
SmoothMuscle4.6
Spinalcord4.4
SubthalamicNucleus4.5
SuperiorCervicalGanglion4.8
TemporalLobe3.75
Testis3.45
TestisGermCell3.35
TestisIntersitial3.45
TestisLeydigCell4.1
TestisSeminiferousTubule3.45
Thalamus4.8
Thymus3.15
Thyroid5
Tongue4.05
Tonsil3.95
Trachea3.4
TrigeminalGanglion4.2
Uterus3.25
UterusCorpus3.65
WholeBlood156.15
Wholebrain3.35
colon4.05
pineal_day5.04
pineal_night4.94
retina4.875
small_intestine3.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P142205
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.2 ± 1
Basal Forebrain1.75 ± 0.19
Basal Part of Pons1.46 ± 0.39
Cerebellar Cortex1.62 ± 0.67
Cerebellar Nuclei2.18 ± 0.7
Claustrum2.68 ± 0.89
Epithalamus1.51 ± 0.72
Frontal Lobe1.59 ± 0.58
Globus Pallidus2.35 ± 0.28
Hypothalamus1.84 ± 0.61
Insula1.64 ± 0.5
Limbic Lobe1.78 ± 0.59
Mesencephalon1.97 ± 0.67
Myelencephalon1.81 ± 0.65
Occipital Lobe1.84 ± 0.62
Parietal Lobe1.88 ± 0.77
Pontine Tegmentum1.8 ± 0.65
Striatum2 ± 0.53
Subthalamus1.98 ± 0.64
Temporal Lobe1.68 ± 0.6
Thalamus1.76 ± 0.58
White Matter2.32 ± 0.39
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00091854 12 178 189 AIFSVGPVSPSR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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