AutismKB 2.0

Annotation Detail for RAB31


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Basic Information Top
Gene Symbol:RAB31 ( Rab22B )
Gene Full Name: RAB31, member RAS oncogene family
Band: 18p11.22
Quick LinksEntrez ID:11031; OMIM: 605694; Uniprot ID:RAB31_HUMAN; ENSEMBL ID: ENSG00000168461; HGNC ID: 9771
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body9 / 70761127
blastocyst1 / 6231916
fetus52 / 56401292
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult157 / 193912180
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor3 / 12794234
bladder carcinoma0 / 174750 
breast (mammary gland) tumor4 / 9417842
cervical tumor12 / 34366349
chondrosarcoma21 / 82823253
colorectal tumor4 / 11424635
esophageal tumor2 / 17290115
gastrointestinal tumor3 / 11936925
germ cell tumor3 / 26384511
glioma25 / 106883233
head and neck tumor11 / 13630280
kidney tumor5 / 6895972
leukemia15 / 95842156
liver tumor3 / 9635931
lung tumor8 / 10312777
lymphoma0 / 717550 
non-neoplasia5 / 9725051
normal254 / 336030775
ovarian tumor3 / 7668239
pancreatic tumor21 / 104616200
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer2 / 10268019
retinoblastoma0 / 463560 
skin tumor4 / 12494932
soft tissue/muscle tissue tumor18 / 125191143
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland5 / 33197150
ascites2 / 4001549
bladder0 / 297570 
blood18 / 123478145
bone24 / 71655334
bone marrow2 / 4880140
brain96 / 110098987
cervix15 / 48171311
connective tissue19 / 149255127
ear0 / 162120 
embryonic tissue14 / 21572264
esophagus2 / 2020998
eye16 / 21105475
heart12 / 89626133
intestine13 / 23447255
kidney14 / 21177766
larynx1 / 2414541
liver9 / 20774343
lung37 / 336974109
lymph0 / 442700 
lymph node5 / 9161054
mammary gland6 / 15327139
mouth8 / 67052119
muscle1 / 1077159
nerve0 / 157680 
ovary3 / 10205129
pancreas22 / 214812102
parathyroid1 / 2053948
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta13 / 28082546
prostate8 / 18934542
salivary gland0 / 201550 
skin11 / 21057452
spleen0 / 539520 
stomach1 / 9661910
testis13 / 33044239
thymus0 / 811310 
thyroid2 / 4747342
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus25 / 232878107
vascular8 / 51780154
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217764_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts4.05
Adipocyte432.45
AdrenalCortex432.05
Adrenalgland361.9
Amygdala307.15
Appendix32.6
AtrioventricularNode11.7
BDCA4+_DentriticCells434.9
Bonemarrow372.7
BronchialEpithelialCells349.25
CD105+_Endothelial40.2
CD14+_Monocytes1425.4
CD19+_BCells(neg._sel.)310.35
CD33+_Myeloid1892.15
CD34+34.75
CD4+_Tcells9.7
CD56+_NKCells151.6
CD71+_EarlyErythroid6.8
CD8+_Tcells5.3
CardiacMyocytes420.6
Caudatenucleus191.65
Cerebellum55.1
CerebellumPeduncles88.2
CiliaryGanglion43.95
CingulateCortex193.4
Colorectaladenocarcinoma13.95
DorsalRootGanglion32.8
FetalThyroid156.5
Fetalbrain344.25
Fetalliver12.05
Fetallung138.65
GlobusPallidus86.3
Heart20.05
Hypothalamus637.55
Kidney15.15
Leukemia_chronicMyelogenousK-56261.55
Leukemia_promyelocytic-HL-602.85
Leukemialymphoblastic(MOLT-4)5.1
Liver16.1
Lung273.45
Lymphnode85.5
Lymphoma_burkitts(Daudi)10.25
Lymphoma_burkitts(Raji)17.3
MedullaOblongata127.25
OccipitalLobe168.7
OlfactoryBulb143.25
Ovary137.9
Pancreas13.35
PancreaticIslet60.35
ParietalLobe129.2
Pituitary30.85
Placenta327.05
Pons78.55
PrefrontalCortex608.65
Prostate29.5
Salivarygland23.85
SkeletalMuscle13.95
Skin13.9
SmoothMuscle731
Spinalcord806.35
SubthalamicNucleus162.55
SuperiorCervicalGanglion24.3
TemporalLobe124.5
Testis151.95
TestisGermCell531.9
TestisIntersitial117.9
TestisLeydigCell86
TestisSeminiferousTubule168.35
Thalamus309.6
Thymus23.5
Thyroid127.35
Tongue41.2
Tonsil30.45
Trachea43.6
TrigeminalGanglion31.9
Uterus303.05
UterusCorpus450.7
WholeBlood1332.9
Wholebrain171.95
colon50.25
pineal_day122.62
pineal_night63.86
retina349.075
small_intestine60.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P141688
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.5 ± 0.22
Basal Forebrain10.6 ± 0.27
Basal Part of Pons10.1 ± 0.45
Cerebellar Cortex9.82 ± 0.24
Cerebellar Nuclei10.52 ± 0.32
Claustrum10.48 ± 0.82
Epithalamus10.34 ± 0.36
Frontal Lobe10.33 ± 0.48
Globus Pallidus11.67 ± 0.45
Hypothalamus10.65 ± 0.3
Insula10.3 ± 0.34
Limbic Lobe10.11 ± 0.64
Mesencephalon10.52 ± 0.4
Myelencephalon10.45 ± 0.46
Occipital Lobe10.5 ± 0.46
Parietal Lobe10.38 ± 0.44
Pontine Tegmentum10.45 ± 0.42
Striatum10.72 ± 0.38
Subthalamus10.54 ± 0.38
Temporal Lobe10.19 ± 0.36
Thalamus10.68 ± 0.28
White Matter10.22 ± 0.23
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
RAB31_HUMAN_0 0 0 0 FLIWDTAGQER PRIDE
RAB31_HUMAN_0 0 0 0 GSAAAVIVYDITK PRIDE
RAB31_HUMAN_0 0 0 0 NAINIEELFQGISR PRIDE
RAB31_HUMAN_126 24 126 149 EVPLKDAKEYAESIGAIVVETSAK PRIDE
RAB31_HUMAN_150 14 150 163 NAINIEELFQGISR PRIDE
RAB31_HUMAN_55 11 55 65 FLIWDTAGQER PRIDE
RAB31_HUMAN_7 11 7 17 VCLLGDTGVGK PRIDE
RAB31_HUMAN_76 13 76 88 GSAAAVIVYDITK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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