AutismKB 2.0

Annotation Detail for RABL2B


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Basic Information Top
Gene Symbol:RABL2B ( FLJ93981,FLJ98216 )
Gene Full Name: RAB, member of RAS oncogene family-like 2B
Band: 22q13.33
Quick LinksEntrez ID:11158; OMIM: 605413; Uniprot ID:RBL2B_HUMAN; ENSEMBL ID: ENSG00000079974; HGNC ID: 9800
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst0 / 623190 
fetus29 / 56401251
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult32 / 193912116
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor2 / 2638457
glioma3 / 10688328
head and neck tumor0 / 1363020 
kidney tumor2 / 6895929
leukemia4 / 9584241
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma1 / 7175513
non-neoplasia0 / 972500 
normal78 / 336030723
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer3 / 10268029
retinoblastoma1 / 4635621
skin tumor2 / 12494916
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor8 / 9025788
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone2 / 7165527
bone marrow0 / 488010 
brain24 / 110098921
cervix1 / 4817120
connective tissue1 / 1492556
ear1 / 1621261
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye4 / 21105418
heart7 / 8962678
intestine0 / 2344720 
kidney5 / 21177723
larynx0 / 241450 
liver0 / 2077430 
lung4 / 33697411
lymph1 / 4427022
lymph node5 / 9161054
mammary gland2 / 15327113
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta5 / 28082517
prostate4 / 18934521
salivary gland0 / 201550 
skin2 / 2105749
spleen3 / 5395255
stomach1 / 9661910
testis15 / 33044245
thymus0 / 811310 
thyroid1 / 4747321
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus10 / 23287842
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219151_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts14.35
Adipocyte14.3
AdrenalCortex16.15
Adrenalgland12.65
Amygdala37.95
Appendix15.7
AtrioventricularNode12.3
BDCA4+_DentriticCells17.5
Bonemarrow14.65
BronchialEpithelialCells12.85
CD105+_Endothelial13.65
CD14+_Monocytes15.55
CD19+_BCells(neg._sel.)24.75
CD33+_Myeloid16.65
CD34+19.7
CD4+_Tcells35.9
CD56+_NKCells22.9
CD71+_EarlyErythroid12.95
CD8+_Tcells30.4
CardiacMyocytes20
Caudatenucleus21.05
Cerebellum13.8
CerebellumPeduncles17.9
CiliaryGanglion11.35
CingulateCortex23.15
Colorectaladenocarcinoma15.6
DorsalRootGanglion11.55
FetalThyroid17
Fetalbrain119.9
Fetalliver12.05
Fetallung23
GlobusPallidus11.6
Heart20.05
Hypothalamus24.35
Kidney13.2
Leukemia_chronicMyelogenousK-56212.2
Leukemia_promyelocytic-HL-6013
Leukemialymphoblastic(MOLT-4)12.6
Liver20.15
Lung22.6
Lymphnode18.3
Lymphoma_burkitts(Daudi)19.05
Lymphoma_burkitts(Raji)20.55
MedullaOblongata13.5
OccipitalLobe18.9
OlfactoryBulb12.85
Ovary9.75
Pancreas11.25
PancreaticIslet22.45
ParietalLobe16.75
Pituitary17.05
Placenta12.05
Pons14.9
PrefrontalCortex63.3
Prostate17.05
Salivarygland12.6
SkeletalMuscle17.9
Skin12.15
SmoothMuscle17
Spinalcord19
SubthalamicNucleus14.1
SuperiorCervicalGanglion18.2
TemporalLobe14.05
Testis24.7
TestisGermCell26.6
TestisIntersitial21.7
TestisLeydigCell16.15
TestisSeminiferousTubule20.95
Thalamus16.4
Thymus20.65
Thyroid40.1
Tongue14.8
Tonsil14.45
Trachea16.2
TrigeminalGanglion15.45
Uterus17.6
UterusCorpus13.3
WholeBlood17.35
Wholebrain19.8
colon15.1
pineal_day23.88
pineal_night22.36
retina25.575
small_intestine18.05
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P250650
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.24 ± 0.3
Basal Forebrain10.17 ± 0.18
Basal Part of Pons10.76 ± 0.29
Cerebellar Cortex10.45 ± 0.26
Cerebellar Nuclei10.18 ± 0.29
Claustrum10.11 ± 0.29
Epithalamus11.24 ± 0.79
Frontal Lobe10.42 ± 0.35
Globus Pallidus9.49 ± 0.24
Hypothalamus10.35 ± 0.25
Insula10.49 ± 0.3
Limbic Lobe10.4 ± 0.38
Mesencephalon10.21 ± 0.27
Myelencephalon10.34 ± 0.42
Occipital Lobe10.43 ± 0.28
Parietal Lobe10.49 ± 0.34
Pontine Tegmentum10.22 ± 0.31
Striatum10.32 ± 0.45
Subthalamus10.33 ± 0.23
Temporal Lobe10.4 ± 0.31
Thalamus10.06 ± 0.22
White Matter9.79 ± 0.22
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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