AutismKB 2.0

Annotation Detail for BAZ1A


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Basic Information Top
Gene Symbol:BAZ1A ( ACF1,DKFZp586E0518,FLJ14383,WALp1,WCRF180,hACF1 )
Gene Full Name: bromodomain adjacent to zinc finger domain, 1A
Band: 14q13.1-q13.2
Quick LinksEntrez ID:11177; OMIM: 605680; Uniprot ID:BAZ1A_HUMAN; ENSEMBL ID: ENSG00000198604; HGNC ID: 960
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst4 / 6231964
fetus35 / 56401262
neonate1 / 3109732
infant0 / 236200 
juvenile3 / 5555653
adult102 / 193912152
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma1 / 1747557
breast (mammary gland) tumor7 / 9417874
cervical tumor1 / 3436629
chondrosarcoma7 / 8282384
colorectal tumor8 / 11424670
esophageal tumor1 / 1729057
gastrointestinal tumor2 / 11936916
germ cell tumor10 / 26384537
glioma2 / 10688318
head and neck tumor8 / 13630258
kidney tumor1 / 6895914
leukemia5 / 9584252
liver tumor7 / 9635972
lung tumor5 / 10312748
lymphoma4 / 7175555
non-neoplasia1 / 9725010
normal141 / 336030741
ovarian tumor5 / 7668265
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS4 / 12568031
prostate cancer2 / 10268019
retinoblastoma4 / 4635686
skin tumor9 / 12494972
soft tissue/muscle tissue tumor9 / 12519171
uterine tumor5 / 9025755
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland2 / 3319760
ascites0 / 400150 
bladder2 / 2975767
blood9 / 12347872
bone8 / 71655111
bone marrow4 / 4880181
brain9 / 11009898
cervix1 / 4817120
connective tissue8 / 14925553
ear1 / 1621261
embryonic tissue10 / 21572246
esophagus1 / 2020949
eye6 / 21105428
heart6 / 8962666
intestine10 / 23447242
kidney4 / 21177718
larynx2 / 2414582
liver10 / 20774348
lung21 / 33697462
lymph4 / 4427090
lymph node5 / 9161054
mammary gland12 / 15327178
mouth1 / 6705214
muscle6 / 10771555
nerve0 / 157680 
ovary6 / 10205158
pancreas10 / 21481246
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta9 / 28082532
prostate9 / 18934547
salivary gland0 / 201550 
skin14 / 21057466
spleen1 / 5395218
stomach1 / 9661910
testis16 / 33044248
thymus6 / 8113173
thyroid4 / 4747384
tonsil3 / 16999176
trachea0 / 524130 
umbilical cord1 / 1368073
uterus10 / 23287842
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217986_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts40.2
Adipocyte5.5
AdrenalCortex6.15
Adrenalgland4.75
Amygdala5.45
Appendix6.8
AtrioventricularNode4.6
BDCA4+_DentriticCells49.85
Bonemarrow8.75
BronchialEpithelialCells35.55
CD105+_Endothelial113.65
CD14+_Monocytes91.95
CD19+_BCells(neg._sel.)29.35
CD33+_Myeloid87.85
CD34+95.25
CD4+_Tcells37.3
CD56+_NKCells52.6
CD71+_EarlyErythroid26.45
CD8+_Tcells41.5
CardiacMyocytes12.4
Caudatenucleus4.85
Cerebellum4.4
CerebellumPeduncles6.3
CiliaryGanglion4.5
CingulateCortex5.6
Colorectaladenocarcinoma9.6
DorsalRootGanglion4.6
FetalThyroid6.45
Fetalbrain5.25
Fetalliver9.75
Fetallung9.95
GlobusPallidus4.1
Heart8.05
Hypothalamus5.65
Kidney4.65
Leukemia_chronicMyelogenousK-56210.75
Leukemia_promyelocytic-HL-6040.55
Leukemialymphoblastic(MOLT-4)40.2
Liver7.9
Lung6
Lymphnode25.2
Lymphoma_burkitts(Daudi)32
Lymphoma_burkitts(Raji)23.3
MedullaOblongata4.55
OccipitalLobe4.8
OlfactoryBulb4.25
Ovary4.9
Pancreas4.8
PancreaticIslet9.55
ParietalLobe6
Pituitary6.35
Placenta5.35
Pons5.25
PrefrontalCortex6.1
Prostate6.4
Salivarygland5.3
SkeletalMuscle8.25
Skin5.75
SmoothMuscle9.3
Spinalcord5.75
SubthalamicNucleus5.05
SuperiorCervicalGanglion7.8
TemporalLobe5.05
Testis6
TestisGermCell23.35
TestisIntersitial6.75
TestisLeydigCell10.55
TestisSeminiferousTubule7.1
Thalamus5.55
Thymus4.65
Thyroid6.65
Tongue6.75
Tonsil14.2
Trachea5.3
TrigeminalGanglion6
Uterus6.75
UterusCorpus5.75
WholeBlood178.4
Wholebrain4.65
colon5.45
pineal_day6.62
pineal_night6.44
retina6.5
small_intestine5.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6311_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.32 ± 0.58
Basal Forebrain2.31 ± 0.47
Basal Part of Pons2.04 ± 0.95
Cerebellar Cortex1.73 ± 0.66
Cerebellar Nuclei2.59 ± 0.92
Claustrum2.69 ± 0.86
Epithalamus2.91 ± 0.37
Frontal Lobe2.13 ± 0.92
Globus Pallidus3.88 ± 0.39
Hypothalamus1.88 ± 0.47
Insula2.36 ± 0.84
Limbic Lobe2.36 ± 1.02
Mesencephalon2.4 ± 0.87
Myelencephalon2.42 ± 0.87
Occipital Lobe2.63 ± 0.89
Parietal Lobe2.21 ± 0.86
Pontine Tegmentum2.48 ± 0.77
Striatum2.84 ± 0.8
Subthalamus2.86 ± 0.57
Temporal Lobe2.16 ± 0.82
Thalamus2.54 ± 0.77
White Matter4.38 ± 0.16
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Baz1aCBCerebellum4.08
4.67
Baz1aCTXCerebral cortex6.53
5.08
Baz1aHIPHippocampal region2.36
2.25
Baz1aHPFHippocampal formation2.86
2.55
Baz1aHYHypothalamus1.15
1.04
Baz1aLSXLateral septal complex1.61
1.4
Baz1aMBMidbrain0.83
1.09
Baz1aMYMedulla4.08
4.86
Baz1aOLFOlfactory bulb11.2
8.69
Baz1aPPons1.59
2.04
Baz1aPALPallidum0.99
1.05
Baz1aRHPRetrohippocampal region3.98
3.16
Baz1asAMYStriatum-like amygdalar nuclei1.58
1.16
Baz1aSTRStriatum5.7
4.09
Baz1aSTRdStriatum dorsal region5.39
3.75
Baz1aSTRvStriatum ventral region10.7
7.54
Baz1aTHThalamus0.44
0.45
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00067328 17 909 925 FHFSDKPQPDSKPTYSR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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