AutismKB 2.0

Annotation Detail for RASSF8


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Basic Information Top
Gene Symbol:RASSF8 ( C12orf2,DKFZp434O0227,FLJ11542,HOJ1 )
Gene Full Name: Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
Band: 12p12.1
Quick LinksEntrez ID:11228; OMIM: 608231; Uniprot ID:RASF8_HUMAN; ENSEMBL ID: ENSG00000123094; HGNC ID: 13232
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst5 / 6231980
fetus19 / 56401233
neonate1 / 3109732
infant1 / 2362042
juvenile0 / 555560 
adult59 / 193912130
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma3 / 17475171
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor8 / 26384530
glioma3 / 10688328
head and neck tumor2 / 13630214
kidney tumor2 / 6895929
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal111 / 336030733
ovarian tumor2 / 7668226
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma2 / 4635643
skin tumor7 / 12494956
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites3 / 4001574
bladder1 / 2975733
blood0 / 1234780 
bone3 / 7165541
bone marrow0 / 488010 
brain21 / 110098919
cervix0 / 481710 
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue13 / 21572260
esophagus0 / 202090 
eye5 / 21105423
heart5 / 8962655
intestine3 / 23447212
kidney5 / 21177723
larynx0 / 241450 
liver1 / 2077434
lung2 / 3369745
lymph0 / 442700 
lymph node0 / 916100 
mammary gland1 / 1532716
mouth0 / 670520 
muscle6 / 10771555
nerve1 / 1576863
ovary4 / 10205139
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta12 / 28082542
prostate3 / 18934515
salivary gland0 / 201550 
skin11 / 21057452
spleen0 / 539520 
stomach2 / 9661920
testis37 / 330442111
thymus0 / 811310 
thyroid2 / 4747342
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus1 / 2328784
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 207754_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.85
Adipocyte6.95
AdrenalCortex8.05
Adrenalgland6.15
Amygdala7.2
Appendix8.05
AtrioventricularNode5.8
BDCA4+_DentriticCells7.3
Bonemarrow7.65
BronchialEpithelialCells6.75
CD105+_Endothelial6.95
CD14+_Monocytes7.3
CD19+_BCells(neg._sel.)7.25
CD33+_Myeloid8.5
CD34+8.75
CD4+_Tcells7
CD56+_NKCells7.65
CD71+_EarlyErythroid6.65
CD8+_Tcells6.2
CardiacMyocytes11.05
Caudatenucleus6.25
Cerebellum5.7
CerebellumPeduncles8.15
CiliaryGanglion6.95
CingulateCortex7.4
Colorectaladenocarcinoma7.05
DorsalRootGanglion5.85
FetalThyroid6.85
Fetalbrain6.6
Fetalliver6.25
Fetallung5.25
GlobusPallidus5.2
Heart10.45
Hypothalamus7.15
Kidney6.15
Leukemia_chronicMyelogenousK-5626.35
Leukemia_promyelocytic-HL-606.2
Leukemialymphoblastic(MOLT-4)5.7
Liver9.9
Lung7.6
Lymphnode5.85
Lymphoma_burkitts(Daudi)9.35
Lymphoma_burkitts(Raji)10.7
MedullaOblongata6.3
OccipitalLobe6.15
OlfactoryBulb5.55
Ovary5.45
Pancreas5.7
PancreaticIslet7.5
ParietalLobe7.95
Pituitary8.3
Placenta6.8
Pons6.9
PrefrontalCortex8.15
Prostate8
Salivarygland5.8
SkeletalMuscle10.45
Skin6
SmoothMuscle7.95
Spinalcord7.4
SubthalamicNucleus6.6
SuperiorCervicalGanglion9.55
TemporalLobe6.45
Testis7.8
TestisGermCell5.95
TestisIntersitial32
TestisLeydigCell7.75
TestisSeminiferousTubule6.05
Thalamus7.25
Thymus5.15
Thyroid8.35
Tongue7.5
Tonsil6.85
Trachea5.85
TrigeminalGanglion8.95
Uterus5.55
UterusCorpus6.8
WholeBlood7.55
Wholebrain5.75
colon7.1
pineal_day8.5
pineal_night8.32
retina8.575
small_intestine6.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P116712
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.39 ± 0.42
Basal Forebrain8.42 ± 0.32
Basal Part of Pons8.12 ± 0.22
Cerebellar Cortex8.21 ± 0.26
Cerebellar Nuclei8.75 ± 0.27
Claustrum8.39 ± 0.31
Epithalamus8.85 ± 0.29
Frontal Lobe8.09 ± 0.51
Globus Pallidus9.39 ± 0.46
Hypothalamus8.23 ± 0.4
Insula8 ± 0.26
Limbic Lobe7.93 ± 0.53
Mesencephalon8.31 ± 0.37
Myelencephalon8.26 ± 0.35
Occipital Lobe8.53 ± 0.41
Parietal Lobe8.19 ± 0.36
Pontine Tegmentum8.25 ± 0.42
Striatum8.28 ± 0.47
Subthalamus8.46 ± 0.1
Temporal Lobe7.9 ± 0.39
Thalamus8.39 ± 0.3
White Matter9.04 ± 0.31
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rassf8CBCerebellum25.12
27.89
Rassf8CTXCerebral cortex35.22
27.66
Rassf8HIPHippocampal region34.34
44.87
Rassf8HPFHippocampal formation31.64
35.9
Rassf8HYHypothalamus47.63
41.97
Rassf8LSXLateral septal complex49.47
40.55
Rassf8MBMidbrain43.59
44.77
Rassf8MYMedulla46.49
59.44
Rassf8OLFOlfactory bulb62.95
64.34
Rassf8PPons38.38
47.19
Rassf8PALPallidum39.6
40.62
Rassf8RHPRetrohippocampal region27.64
24.73
Rassf8sAMYStriatum-like amygdalar nuclei56.95
49.13
Rassf8STRStriatum23.71
18.43
Rassf8STRdStriatum dorsal region16.71
12.55
Rassf8STRvStriatum ventral region20.94
14.39
Rassf8THThalamus37.74
35.36
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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