AutismKB 2.0

Annotation Detail for ERI2


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Basic Information Top
Gene Symbol:ERI2 ( EXOD1,KIAA1504,MGC16943 )
Gene Full Name: ERI1 exoribonuclease family member 2
Band: 16p12.3
Quick LinksEntrez ID:112479; OMIM: NA; Uniprot ID:ERI2_HUMAN; ENSEMBL ID: ENSG00000196678; HGNC ID: 30541
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus15 / 56401226
neonate1 / 3109732
infant0 / 236200 
juvenile0 / 555560 
adult48 / 193912124
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor1 / 3436629
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor10 / 26384537
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia6 / 9584262
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal55 / 336030716
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer25 / 102680243
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone1 / 7165513
bone marrow3 / 4880161
brain12 / 110098910
cervix2 / 4817141
connective tissue0 / 1492550 
ear1 / 1621261
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye1 / 2110544
heart1 / 8962611
intestine1 / 2344724
kidney3 / 21177714
larynx0 / 241450 
liver2 / 2077439
lung4 / 33697411
lymph0 / 442700 
lymph node7 / 9161076
mammary gland1 / 1532716
mouth1 / 6705214
muscle5 / 10771546
nerve1 / 1576863
ovary0 / 1020510 
pancreas3 / 21481213
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta3 / 28082510
prostate25 / 189345132
salivary gland0 / 201550 
skin2 / 2105749
spleen0 / 539520 
stomach0 / 966190 
testis19 / 33044257
thymus2 / 8113124
thyroid0 / 474730 
tonsil1 / 1699958
trachea1 / 5241319
umbilical cord0 / 136800 
uterus6 / 23287825
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213365_at
Cell line Expression level Expression bar
721_B_lymphoblasts16.45
Adipocyte6.7
AdrenalCortex8.3
Adrenalgland6.2
Amygdala7
Appendix8.25
AtrioventricularNode6.6
BDCA4+_DentriticCells7.45
Bonemarrow7.35
BronchialEpithelialCells7.15
CD105+_Endothelial219.8
CD14+_Monocytes7.6
CD19+_BCells(neg._sel.)7.5
CD33+_Myeloid8.55
CD34+102.4
CD4+_Tcells6.75
CD56+_NKCells7.6
CD71+_EarlyErythroid119.6
CD8+_Tcells5.95
CardiacMyocytes11.65
Caudatenucleus6.4
Cerebellum5.65
CerebellumPeduncles8.15
CiliaryGanglion6.35
CingulateCortex7.2
Colorectaladenocarcinoma6.8
DorsalRootGanglion6.75
FetalThyroid7.15
Fetalbrain6.65
Fetalliver7.65
Fetallung5.65
GlobusPallidus5.6
Heart11.35
Hypothalamus7.75
Kidney6.2
Leukemia_chronicMyelogenousK-56240.05
Leukemia_promyelocytic-HL-607.2
Leukemialymphoblastic(MOLT-4)5.1
Liver10.7
Lung7.35
Lymphnode5.6
Lymphoma_burkitts(Daudi)9.4
Lymphoma_burkitts(Raji)10.45
MedullaOblongata6
OccipitalLobe6.35
OlfactoryBulb5.6
Ovary5.4
Pancreas6.3
PancreaticIslet9.2
ParietalLobe7.75
Pituitary8.05
Placenta6.75
Pons7.15
PrefrontalCortex8.3
Prostate8
Salivarygland5.9
SkeletalMuscle10.15
Skin6.25
SmoothMuscle7.95
Spinalcord7.4
SubthalamicNucleus6.6
SuperiorCervicalGanglion13.75
TemporalLobe6.55
Testis6.1
TestisGermCell8.6
TestisIntersitial7.55
TestisLeydigCell7.6
TestisSeminiferousTubule8.1
Thalamus7.2
Thymus5
Thyroid10
Tongue7.55
Tonsil7
Trachea5.8
TrigeminalGanglion9.55
Uterus5.65
UterusCorpus7.7
WholeBlood7.6
Wholebrain5.4
colon17.05
pineal_day8.9
pineal_night8.64
retina8.65
small_intestine6.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P129717
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.04 ± 1.17
Basal Forebrain1.45 ± 0.24
Basal Part of Pons1.36 ± 0.47
Cerebellar Cortex1.41 ± 0.89
Cerebellar Nuclei2.09 ± 1.17
Claustrum2.65 ± 1.32
Epithalamus1.33 ± 0.55
Frontal Lobe1.5 ± 0.87
Globus Pallidus2 ± 0.39
Hypothalamus1.55 ± 0.73
Insula1.2 ± 0.54
Limbic Lobe1.43 ± 0.68
Mesencephalon1.58 ± 0.68
Myelencephalon1.56 ± 0.74
Occipital Lobe1.32 ± 0.53
Parietal Lobe1.57 ± 0.71
Pontine Tegmentum1.61 ± 0.83
Striatum1.59 ± 0.56
Subthalamus1.55 ± 0.52
Temporal Lobe1.4 ± 0.7
Thalamus1.48 ± 0.72
White Matter2.35 ± 0.71
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Exod1PPons0
0
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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