Annotation Detail for FAM83F
Basic Information Top
| Gene Symbol: | FAM83F ( - ) |
|---|---|
| Gene Full Name: | family with sequence similarity 83, member F |
| Band: | 22q13.1 |
| Quick Links | Entrez ID:113828; OMIM: NA; Uniprot ID:FA83F_HUMAN; ENSEMBL ID: ENSG00000133477; HGNC ID: 25148 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.197680
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 15 / 1939121 | 7 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 1 / 34366 | 29 |  |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 19 / 3360307 | 5 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 3 / 1100989 | 2 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 7 / 330442 | 21 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_5319_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.12 ± 0.99 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.66 ± 0.19 | |
| Basal Part of Pons | 1.36 ± 0.34 | |
| Cerebellar Cortex | 1.59 ± 0.76 | |
| Cerebellar Nuclei | 1.94 ± 0.74 | |
| Claustrum | 2.52 ± 1.03 | |
| Epithalamus | 1.4 ± 0.77 | |
| Frontal Lobe | 1.5 ± 0.59 | |
| Globus Pallidus | 2.28 ± 0.43 | |
| Hypothalamus | 1.76 ± 0.67 | |
| Insula | 1.79 ± 0.89 | |
| Limbic Lobe | 1.64 ± 0.59 | |
| Mesencephalon | 1.82 ± 0.68 | |
| Myelencephalon | 1.68 ± 0.65 | |
| Occipital Lobe | 1.7 ± 0.59 | |
| Parietal Lobe | 1.68 ± 0.67 | |
| Pontine Tegmentum | 1.71 ± 0.65 | |
| Striatum | 1.77 ± 0.51 | |
| Subthalamus | 1.82 ± 0.66 | |
| Temporal Lobe | 1.59 ± 0.67 | |
| Thalamus | 1.63 ± 0.56 | |
| White Matter | 2.15 ± 0.21 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| AW544981 | CB | Cerebellum | 17.81 |  |
| 27.29 | | |||
| AW544981 | CTX | Cerebral cortex | 58.22 | |
| 43.05 | | |||
| AW544981 | HIP | Hippocampal region | 35.94 | |
| 36.88 | | |||
| AW544981 | HPF | Hippocampal formation | 42.98 | |
| 39.14 | | |||
| AW544981 | HY | Hypothalamus | 13.23 | |
| 9.73 | | |||
| AW544981 | LSX | Lateral septal complex | 9.04 | |
| 7.22 | | |||
| AW544981 | MB | Midbrain | 22.4 | |
| 21.3 | | |||
| AW544981 | MY | Medulla | 20.96 | |
| 24.97 | | |||
| AW544981 | OLF | Olfactory bulb | 47.99 | |
| 37.71 | | |||
| AW544981 | P | Pons | 23.06 | |
| 26.61 | | |||
| AW544981 | PAL | Pallidum | 10.4 | |
| 9.36 | | |||
| AW544981 | RHP | Retrohippocampal region | 54.43 | |
| 41.9 | | |||
| AW544981 | sAMY | Striatum-like amygdalar nuclei | 37.2 | |
| 26.26 | | |||
| AW544981 | STR | Striatum | 21.07 | |
| 16.63 | | |||
| AW544981 | STRd | Striatum dorsal region | 20.25 | |
| 16.33 | | |||
| AW544981 | STRv | Striatum ventral region | 20.57 | |
| 16.62 | | |||
| AW544981 | TH | Thalamus | 31.44 | |
| 25.18 | |