Annotation Detail for BTBD9
Basic Information Top
| Gene Symbol: | BTBD9 ( FLJ32945,KIAA1880,MGC120517,MGC120519,MGC120520,dJ322I12.1 ) |
|---|---|
| Gene Full Name: | BTB (POZ) domain containing 9 |
| Band: | 6p21.2 |
| Quick Links | Entrez ID:114781; OMIM: 611237; Uniprot ID:BTBD9_HUMAN; ENSEMBL ID: ENSG00000183826; HGNC ID: 21228 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.603858
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 13 / 564012 | 23 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 25 / 1939121 | 12 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 70 / 3360307 | 20 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 39 / 1100989 | 35 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 0 / 89626 | 0 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 10 / 336974 | 29 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 1 / 15768 | 63 |  |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 1 / 96619 | 10 | |
| testis | 4 / 330442 | 12 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P85169
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.66 ± 0.48 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.26 ± 0.41 | |
| Basal Part of Pons | 3.91 ± 0.46 | |
| Cerebellar Cortex | 3.7 ± 0.43 | |
| Cerebellar Nuclei | 3.84 ± 0.4 | |
| Claustrum | 4.32 ± 0.76 | |
| Epithalamus | 3.45 ± 0.82 | |
| Frontal Lobe | 4.27 ± 0.59 | |
| Globus Pallidus | 3.37 ± 0.92 | |
| Hypothalamus | 3.64 ± 0.82 | |
| Insula | 4.64 ± 0.33 | |
| Limbic Lobe | 4.57 ± 0.6 | |
| Mesencephalon | 4.27 ± 0.63 | |
| Myelencephalon | 4.22 ± 0.59 | |
| Occipital Lobe | 4.18 ± 0.59 | |
| Parietal Lobe | 4.34 ± 0.71 | |
| Pontine Tegmentum | 4.22 ± 0.62 | |
| Striatum | 4.36 ± 0.63 | |
| Subthalamus | 4.58 ± 0.45 | |
| Temporal Lobe | 4.46 ± 0.45 | |
| Thalamus | 3.99 ± 0.53 | |
| White Matter | 2.62 ± 1.21 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Btbd9 | CB | Cerebellum | 63.11 | |
| 85.45 | | |||
| Btbd9 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Btbd9 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Btbd9 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Btbd9 | HY | Hypothalamus | 72.67 | |
| 57.7 | | |||
| Btbd9 | LSX | Lateral septal complex | 70.12 | |
| 54.6 | | |||
| Btbd9 | MB | Midbrain | 65.04 | |
| 56.75 | | |||
| Btbd9 | MY | Medulla | 76.37 | |
| 80.31 | | |||
| Btbd9 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Btbd9 | P | Pons | 60.07 | |
| 59.3 | | |||
| Btbd9 | PAL | Pallidum | 64.8 | |
| 55.73 | | |||
| Btbd9 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Btbd9 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 88.8 | | |||
| Btbd9 | STR | Striatum | 79.97 | |
| 58.91 | | |||
| Btbd9 | STRd | Striatum dorsal region | 69.01 | |
| 50.47 | | |||
| Btbd9 | STRv | Striatum ventral region | 97.91 | |
| 66.42 | | |||
| Btbd9 | TH | Thalamus | 86.04 | |
| 73.67 | |