Annotation Detail for GPRIN1
Basic Information Top
| Gene Symbol: | GPRIN1 ( GRIN1,KIAA1893 ) |
|---|---|
| Gene Full Name: | G protein regulated inducer of neurite outgrowth 1 |
| Band: | 5q35.2 |
| Quick Links | Entrez ID:114787; OMIM: 611239; Uniprot ID:GRIN1_HUMAN; ENSEMBL ID: ENSG00000169258; HGNC ID: 24835 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.150549
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 24 / 564012 | 42 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 10 / 1939121 | 5 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 44 / 3360307 | 13 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 7 / 104616 | 66 |  |
| primitive neuroectodermal tumor of the CNS | 26 / 125680 | 206 |  |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 52 / 1100989 | 47 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 0 / 89626 | 0 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 10 / 336974 | 29 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P160466
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.05 ± 0.68 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.12 ± 0.48 | |
| Basal Part of Pons | 7.98 ± 0.27 | |
| Cerebellar Cortex | 7.85 ± 0.22 | |
| Cerebellar Nuclei | 6.07 ± 0.78 | |
| Claustrum | 7.58 ± 0.48 | |
| Epithalamus | 6.54 ± 0.73 | |
| Frontal Lobe | 7.48 ± 0.64 | |
| Globus Pallidus | 5.13 ± 0.89 | |
| Hypothalamus | 7.56 ± 1.05 | |
| Insula | 7.83 ± 0.26 | |
| Limbic Lobe | 7.77 ± 0.56 | |
| Mesencephalon | 6.92 ± 0.8 | |
| Myelencephalon | 7.12 ± 0.97 | |
| Occipital Lobe | 6.67 ± 0.81 | |
| Parietal Lobe | 7.23 ± 0.51 | |
| Pontine Tegmentum | 7.12 ± 0.8 | |
| Striatum | 5.52 ± 1.02 | |
| Subthalamus | 6.38 ± 0.48 | |
| Temporal Lobe | 7.74 ± 0.46 | |
| Thalamus | 6.66 ± 0.57 | |
| White Matter | 4.92 ± 0.7 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gprin1 | CB | Cerebellum | 48.49 | |
| 53.52 | | |||
| Gprin1 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Gprin1 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Gprin1 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Gprin1 | HY | Hypothalamus | 46.67 | |
| 27.45 | | |||
| Gprin1 | LSX | Lateral septal complex | 48.5 | |
| 27.4 | | |||
| Gprin1 | MB | Midbrain | 29.5 | |
| 20.78 | | |||
| Gprin1 | MY | Medulla | 24.37 | |
| 18.97 | | |||
| Gprin1 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Gprin1 | P | Pons | 27.39 | |
| 19.54 | | |||
| Gprin1 | PAL | Pallidum | 46.7 | |
| 32.95 | | |||
| Gprin1 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Gprin1 | sAMY | Striatum-like amygdalar nuclei | 99.54 | |
| 88.18 | | |||
| Gprin1 | STR | Striatum | 31.35 | |
| 22.61 | | |||
| Gprin1 | STRd | Striatum dorsal region | 14.91 | |
| 11.77 | | |||
| Gprin1 | STRv | Striatum ventral region | 34.43 | |
| 20.53 | | |||
| Gprin1 | TH | Thalamus | 28.83 | |
| 24.31 | |