Annotation Detail for ESCO1
Basic Information Top
| Gene Symbol: | ESCO1 ( A930014I12Rik,CTF,ECO1,EFO1,ESO1,KIAA1911,MGC105022 ) |
|---|---|
| Gene Full Name: | establishment of cohesion 1 homolog 1 (S. cerevisiae) |
| Band: | 18q11.2 |
| Quick Links | Entrez ID:114799; OMIM: 609674; Uniprot ID:ESCO1_HUMAN; ENSEMBL ID: ENSG00000141446; HGNC ID: 24645 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.464733
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 24 / 564012 | 42 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 34 / 1939121 | 17 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 1 / 17290 | 57 |  |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 76 / 3360307 | 22 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 13 / 1100989 | 11 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 4 / 211054 | 18 | |
| heart | 5 / 89626 | 55 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 4 / 336974 | 11 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 9 / 189345 | 47 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 3 / 210574 | 14 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 14 / 330442 | 42 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P317347
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.55 ± 0.81 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.31 ± 0.35 | |
| Basal Part of Pons | 3.47 ± 0.51 | |
| Cerebellar Cortex | 3.9 ± 0.3 | |
| Cerebellar Nuclei | 3.6 ± 0.47 | |
| Claustrum | 3.88 ± 0.71 | |
| Epithalamus | 3.51 ± 0.55 | |
| Frontal Lobe | 3.48 ± 0.56 | |
| Globus Pallidus | 3.67 ± 0.41 | |
| Hypothalamus | 3.68 ± 0.47 | |
| Insula | 3.42 ± 0.57 | |
| Limbic Lobe | 3.49 ± 0.59 | |
| Mesencephalon | 3.64 ± 0.62 | |
| Myelencephalon | 3.55 ± 0.56 | |
| Occipital Lobe | 3.82 ± 0.4 | |
| Parietal Lobe | 3.56 ± 0.64 | |
| Pontine Tegmentum | 3.68 ± 0.69 | |
| Striatum | 3.35 ± 0.65 | |
| Subthalamus | 3.72 ± 0.29 | |
| Temporal Lobe | 3.45 ± 0.53 | |
| Thalamus | 3.66 ± 0.51 | |
| White Matter | 4.06 ± 0.1 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Esco1 | CB | Cerebellum | 17.15 | |
| 17.25 | | |||
| Esco1 | CTX | Cerebral cortex | 79.5 | |
| 62.06 | | |||
| Esco1 | HIP | Hippocampal region | 28.12 | |
| 32.55 | | |||
| Esco1 | HPF | Hippocampal formation | 32.22 | |
| 32.6 | | |||
| Esco1 | HY | Hypothalamus | 24.6 | |
| 19.95 | | |||
| Esco1 | LSX | Lateral septal complex | 41.26 | |
| 31.28 | | |||
| Esco1 | MB | Midbrain | 23.77 | |
| 20.97 | | |||
| Esco1 | MY | Medulla | 11.77 | |
| 11.76 | | |||
| Esco1 | OLF | Olfactory bulb | 58.66 | |
| 52.39 | | |||
| Esco1 | P | Pons | 16.91 | |
| 17.27 | | |||
| Esco1 | PAL | Pallidum | 25.37 | |
| 22.77 | | |||
| Esco1 | RHP | Retrohippocampal region | 41.17 | |
| 34.12 | | |||
| Esco1 | sAMY | Striatum-like amygdalar nuclei | 32.84 | |
| 25.85 | | |||
| Esco1 | STR | Striatum | 34.33 | |
| 25.87 | | |||
| Esco1 | STRd | Striatum dorsal region | 34.11 | |
| 26.04 | | |||
| Esco1 | STRv | Striatum ventral region | 33.41 | |
| 23.33 | | |||
| Esco1 | TH | Thalamus | 34.21 | |
| 27.88 | |