Annotation Detail for RNF157
Basic Information Top
| Gene Symbol: | RNF157 ( - ) |
|---|---|
| Gene Full Name: | ring finger protein 157 |
| Band: | 17q25.1 |
| Quick Links | Entrez ID:114804; OMIM: NA; Uniprot ID:RN157_HUMAN; ENSEMBL ID: ENSG00000141576; HGNC ID: 29402 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.500643
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 11 / 564012 | 19 | |
| neonate | 0 / 31097 | 0 | |
| infant | 7 / 23620 | 296 |  |
| juvenile | 0 / 55556 | 0 | |
| adult | 52 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 118 / 3360307 | 35 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 13 / 46356 | 280 | |
| skin tumor | 13 / 124949 | 104 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 51 / 1100989 | 46 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 29 / 211054 | 137 | |
| heart | 1 / 89626 | 11 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 7 / 336974 | 20 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 11 / 214812 | 51 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 13 / 210574 | 61 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 19 / 330442 | 57 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_24_P383459
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.73 ± 0.6 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.46 ± 0.36 | |
| Basal Part of Pons | 6.51 ± 0.25 | |
| Cerebellar Cortex | 5.38 ± 0.44 | |
| Cerebellar Nuclei | 6.11 ± 0.48 | |
| Claustrum | 6.23 ± 0.89 | |
| Epithalamus | 4.69 ± 0.73 | |
| Frontal Lobe | 6 ± 0.59 | |
| Globus Pallidus | 5.54 ± 0.6 | |
| Hypothalamus | 5.2 ± 0.55 | |
| Insula | 5.52 ± 0.52 | |
| Limbic Lobe | 6.11 ± 0.57 | |
| Mesencephalon | 5.86 ± 0.56 | |
| Myelencephalon | 5.84 ± 0.65 | |
| Occipital Lobe | 6.41 ± 0.49 | |
| Parietal Lobe | 6.27 ± 0.38 | |
| Pontine Tegmentum | 5.9 ± 0.7 | |
| Striatum | 5.88 ± 0.56 | |
| Subthalamus | 5.94 ± 0.28 | |
| Temporal Lobe | 5.82 ± 0.61 | |
| Thalamus | 6.17 ± 0.32 | |
| White Matter | 4.94 ± 0.71 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Rnf157 | CB | Cerebellum | 53.47 | |
| 99.78 | | |||
| Rnf157 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Rnf157 | HIP | Hippocampal region | 76.54 | |
| 100 | | |||
| Rnf157 | HPF | Hippocampal formation | 86.5 | |
| 100 | | |||
| Rnf157 | HY | Hypothalamus | 23.93 | |
| 26.06 | | |||
| Rnf157 | LSX | Lateral septal complex | 28.6 | |
| 29.13 | | |||
| Rnf157 | MB | Midbrain | 54.92 | |
| 67.78 | | |||
| Rnf157 | MY | Medulla | 78.55 | |
| 100 | | |||
| Rnf157 | OLF | Olfactory bulb | 91.95 | |
| 100 | | |||
| Rnf157 | P | Pons | 53.81 | |
| 81.12 | | |||
| Rnf157 | PAL | Pallidum | 41.1 | |
| 52.61 | | |||
| Rnf157 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Rnf157 | sAMY | Striatum-like amygdalar nuclei | 61.45 | |
| 61.12 | | |||
| Rnf157 | STR | Striatum | 40.13 | |
| 38.88 | | |||
| Rnf157 | STRd | Striatum dorsal region | 41.34 | |
| 40.43 | | |||
| Rnf157 | STRv | Striatum ventral region | 25.35 | |
| 22.92 | | |||
| Rnf157 | TH | Thalamus | 31.18 | |
| 36.63 | |