Annotation Detail for OSBPL6
Basic Information Top
| Gene Symbol: | OSBPL6 ( FLJ36583,MGC59642,ORP6 ) |
|---|---|
| Gene Full Name: | oxysterol binding protein-like 6 |
| Band: | 2q31.2 |
| Quick Links | Entrez ID:114880; OMIM: 606734; Uniprot ID:OSBL6_HUMAN; ENSEMBL ID: ENSG00000079156; HGNC ID: 16388 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.318775
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 20 / 564012 | 35 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 37 / 1939121 | 19 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 11 / 263845 | 41 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 7 / 103127 | 67 |  |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 61 / 3360307 | 18 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 40 / 1100989 | 36 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 1 / 24145 | 41 | |
| liver | 0 / 207743 | 0 | |
| lung | 13 / 336974 | 38 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 10 / 330442 | 30 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 4 / 52413 | 76 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_1956_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.7 ± 0.23 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7 ± 0.16 | |
| Basal Part of Pons | 7.75 ± 0.33 | |
| Cerebellar Cortex | 7.27 ± 0.25 | |
| Cerebellar Nuclei | 7.79 ± 0.45 | |
| Claustrum | 7.67 ± 0.52 | |
| Epithalamus | 7.49 ± 0.53 | |
| Frontal Lobe | 7.51 ± 0.36 | |
| Globus Pallidus | 7.62 ± 0.31 | |
| Hypothalamus | 7.06 ± 0.5 | |
| Insula | 7.36 ± 0.41 | |
| Limbic Lobe | 7.68 ± 0.35 | |
| Mesencephalon | 7.55 ± 0.5 | |
| Myelencephalon | 7.53 ± 0.4 | |
| Occipital Lobe | 8.12 ± 0.4 | |
| Parietal Lobe | 7.8 ± 0.33 | |
| Pontine Tegmentum | 7.63 ± 0.39 | |
| Striatum | 7.51 ± 0.37 | |
| Subthalamus | 7.45 ± 0.09 | |
| Temporal Lobe | 7.51 ± 0.46 | |
| Thalamus | 7.6 ± 0.36 | |
| White Matter | 5.8 ± 0.59 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Osbpl6 | CB | Cerebellum | 33.92 | |
| 63.44 | | |||
| Osbpl6 | CTX | Cerebral cortex | 42.57 | |
| 35.01 | | |||
| Osbpl6 | HIP | Hippocampal region | 49.65 | |
| 83.88 | | |||
| Osbpl6 | HPF | Hippocampal formation | 54.18 | |
| 71.94 | | |||
| Osbpl6 | HY | Hypothalamus | 26.94 | |
| 23.17 | | |||
| Osbpl6 | LSX | Lateral septal complex | 29.74 | |
| 20.79 | | |||
| Osbpl6 | MB | Midbrain | 30.57 | |
| 32.36 | | |||
| Osbpl6 | MY | Medulla | 38.44 | |
| 60.39 | | |||
| Osbpl6 | OLF | Olfactory bulb | 37.82 | |
| 30.68 | | |||
| Osbpl6 | P | Pons | 41.96 | |
| 56.29 | | |||
| Osbpl6 | PAL | Pallidum | 22.64 | |
| 22.19 | | |||
| Osbpl6 | RHP | Retrohippocampal region | 63.33 | |
| 60.67 | | |||
| Osbpl6 | sAMY | Striatum-like amygdalar nuclei | 24.21 | |
| 19.13 | | |||
| Osbpl6 | STR | Striatum | 12.03 | |
| 10.06 | | |||
| Osbpl6 | STRd | Striatum dorsal region | 7.78 | |
| 7.4 | | |||
| Osbpl6 | STRv | Striatum ventral region | 13.39 | |
| 10.15 | | |||
| Osbpl6 | TH | Thalamus | 39.02 | |
| 36.75 | |