AutismKB 2.0

Annotation Detail for C1QTNF3


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Basic Information Top
Gene Symbol:C1QTNF3 ( C1ATNF3,CORS26,CTRP3,Corcs,Cors,Cors-26,FLJ37576 )
Gene Full Name: C1q and tumor necrosis factor related protein 3
Band: 5p13.2
Quick LinksEntrez ID:114899; OMIM: 612045; Uniprot ID:C1QT3_HUMAN; ENSEMBL ID: ENSG00000082196; HGNC ID: 14326
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus17 / 56401230
neonate4 / 31097128
infant0 / 236200 
juvenile2 / 5555635
adult40 / 193912120
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor1 / 2638453
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal94 / 336030727
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor15 / 125191119
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone0 / 716550 
bone marrow0 / 488010 
brain21 / 110098919
cervix1 / 4817120
connective tissue19 / 149255127
ear1 / 1621261
embryonic tissue5 / 21572223
esophagus0 / 202090 
eye4 / 21105418
heart5 / 8962655
intestine12 / 23447251
kidney4 / 21177718
larynx0 / 241450 
liver0 / 2077430 
lung5 / 33697414
lymph0 / 442700 
lymph node1 / 9161010
mammary gland5 / 15327132
mouth0 / 670520 
muscle4 / 10771537
nerve0 / 157680 
ovary0 / 1020510 
pancreas4 / 21481218
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta5 / 28082517
prostate1 / 1893455
salivary gland0 / 201550 
skin1 / 2105744
spleen0 / 539520 
stomach5 / 9661951
testis7 / 33044221
thymus3 / 8113136
thyroid0 / 474730 
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord4 / 13680292
uterus6 / 23287825
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220988_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.5
Adipocyte7.6
AdrenalCortex8.05
Adrenalgland6.45
Amygdala8.25
Appendix7.8
AtrioventricularNode7.15
BDCA4+_DentriticCells7.85
Bonemarrow7.75
BronchialEpithelialCells7.25
CD105+_Endothelial7.65
CD14+_Monocytes8.1
CD19+_BCells(neg._sel.)7.95
CD33+_Myeloid9.75
CD34+10.4
CD4+_Tcells7.95
CD56+_NKCells9.25
CD71+_EarlyErythroid7.2
CD8+_Tcells7.2
CardiacMyocytes9.45
Caudatenucleus7.15
Cerebellum8.35
CerebellumPeduncles10.2
CiliaryGanglion6.4
CingulateCortex9.8
Colorectaladenocarcinoma7.65
DorsalRootGanglion6.85
FetalThyroid7.45
Fetalbrain7.8
Fetalliver6.7
Fetallung6.4
GlobusPallidus6
Heart9.55
Hypothalamus10
Kidney6.4
Leukemia_chronicMyelogenousK-5626.95
Leukemia_promyelocytic-HL-606.7
Leukemialymphoblastic(MOLT-4)6.75
Liver10
Lung8.4
Lymphnode6.75
Lymphoma_burkitts(Daudi)9.85
Lymphoma_burkitts(Raji)10.45
MedullaOblongata7.15
OccipitalLobe6.75
OlfactoryBulb6.3
Ovary5.65
Pancreas6.1
PancreaticIslet8.25
ParietalLobe8.7
Pituitary8.95
Placenta8.1
Pons7.45
PrefrontalCortex9.25
Prostate8.9
Salivarygland9.15
SkeletalMuscle9
Skin6.7
SmoothMuscle8.55
Spinalcord13.95
SubthalamicNucleus7.3
SuperiorCervicalGanglion10.2
TemporalLobe7.25
Testis6.7
TestisGermCell6.3
TestisIntersitial6.55
TestisLeydigCell7.8
TestisSeminiferousTubule6.65
Thalamus7.8
Thymus6
Thyroid9.65
Tongue8.65
Tonsil7.5
Trachea6.65
TrigeminalGanglion8.2
Uterus6.3
UterusCorpus6.9
WholeBlood8.2
Wholebrain6.6
colon7.8
pineal_day10
pineal_night9.52
retina9.775
small_intestine7.5
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P122068
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.06 ± 0.56
Basal Forebrain6.18 ± 0.43
Basal Part of Pons5.39 ± 0.31
Cerebellar Cortex6.25 ± 0.29
Cerebellar Nuclei5.71 ± 0.6
Claustrum6.06 ± 0.48
Epithalamus6.4 ± 0.41
Frontal Lobe5.61 ± 0.55
Globus Pallidus6.86 ± 0.57
Hypothalamus6.08 ± 0.46
Insula5.7 ± 0.37
Limbic Lobe5.69 ± 0.58
Mesencephalon6 ± 0.57
Myelencephalon6 ± 0.52
Occipital Lobe5.94 ± 0.57
Parietal Lobe5.68 ± 0.6
Pontine Tegmentum5.9 ± 0.49
Striatum6.34 ± 0.71
Subthalamus5.32 ± 0.67
Temporal Lobe5.7 ± 0.43
Thalamus5.9 ± 0.35
White Matter7.38 ± 0.43
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
C1qtnf3CBCerebellum0
0
C1qtnf3CTXCerebral cortex0
0
C1qtnf3HIPHippocampal region0
0
C1qtnf3HPFHippocampal formation0
0
C1qtnf3HYHypothalamus0
0
C1qtnf3LSXLateral septal complex0
0
C1qtnf3MBMidbrain0
0
C1qtnf3MYMedulla0
0
C1qtnf3OLFOlfactory bulb0
0
C1qtnf3PPons0
0
C1qtnf3PALPallidum0
0
C1qtnf3RHPRetrohippocampal region0
0
C1qtnf3sAMYStriatum-like amygdalar nuclei0
0
C1qtnf3STRStriatum0
0
C1qtnf3STRdStriatum dorsal region0
0
C1qtnf3STRvStriatum ventral region0
0
C1qtnf3THThalamus0
0
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00773160 11 201 211 SDTSSNHAVLK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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