Annotation Detail for C1QTNF6
Basic Information Top
| Gene Symbol: | C1QTNF6 ( CTRP6,ZACRP6 ) |
|---|---|
| Gene Full Name: | C1q and tumor necrosis factor related protein 6 |
| Band: | 22q12.3 |
| Quick Links | Entrez ID:114904; OMIM: NA; Uniprot ID:C1QT6_HUMAN; ENSEMBL ID: ENSG00000133466; HGNC ID: 14343 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.22011
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 13 / 564012 | 23 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 53 / 1939121 | 27 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 63 / 3360307 | 18 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 7 / 1100989 | 6 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 2 / 211054 | 9 | |
| heart | 1 / 89626 | 11 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 32 / 280825 | 113 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 1 / 210574 | 4 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 0 / 96619 | 0 | |
| testis | 3 / 330442 | 9 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: A_24_P211565
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.5 ± 0.71 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.66 ± 0.39 | |
| Basal Part of Pons | 3.41 ± 0.7 | |
| Cerebellar Cortex | 2.89 ± 0.48 | |
| Cerebellar Nuclei | 3.49 ± 0.64 | |
| Claustrum | 3.23 ± 0.83 | |
| Epithalamus | 3.97 ± 0.7 | |
| Frontal Lobe | 3.16 ± 0.74 | |
| Globus Pallidus | 4.69 ± 0.43 | |
| Hypothalamus | 3.32 ± 0.71 | |
| Insula | 3.05 ± 0.79 | |
| Limbic Lobe | 3.25 ± 0.81 | |
| Mesencephalon | 3.18 ± 0.63 | |
| Myelencephalon | 3.36 ± 0.7 | |
| Occipital Lobe | 3.38 ± 0.73 | |
| Parietal Lobe | 3.36 ± 0.68 | |
| Pontine Tegmentum | 3.34 ± 0.8 | |
| Striatum | 3.58 ± 0.6 | |
| Subthalamus | 2.85 ± 0.85 | |
| Temporal Lobe | 3.27 ± 0.58 | |
| Thalamus | 3.24 ± 0.72 | |
| White Matter | 5.54 ± 0.34 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| C1qtnf6 | CB | Cerebellum | 11.22 | |
| 15.68 | | |||
| C1qtnf6 | CTX | Cerebral cortex | 14.23 | |
| 10.33 | | |||
| C1qtnf6 | HIP | Hippocampal region | 9.31 | |
| 7.95 | | |||
| C1qtnf6 | HPF | Hippocampal formation | 12.44 | |
| 10.17 | | |||
| C1qtnf6 | HY | Hypothalamus | 6.07 | |
| 4.1 | | |||
| C1qtnf6 | LSX | Lateral septal complex | 1.13 | |
| 0.64 | | |||
| C1qtnf6 | MB | Midbrain | 5.64 | |
| 4.94 | | |||
| C1qtnf6 | MY | Medulla | 18.66 | |
| 16.86 | | |||
| C1qtnf6 | OLF | Olfactory bulb | 21.24 | |
| 16.34 | | |||
| C1qtnf6 | P | Pons | 10.55 | |
| 9.38 | | |||
| C1qtnf6 | PAL | Pallidum | 12.34 | |
| 9.88 | | |||
| C1qtnf6 | RHP | Retrohippocampal region | 17.36 | |
| 13.02 | | |||
| C1qtnf6 | sAMY | Striatum-like amygdalar nuclei | 10.61 | |
| 6.72 | | |||
| C1qtnf6 | STR | Striatum | 10.47 | |
| 7 | | |||
| C1qtnf6 | STRd | Striatum dorsal region | 10.62 | |
| 7.46 | | |||
| C1qtnf6 | STRv | Striatum ventral region | 10.39 | |
| 5.88 | | |||
| C1qtnf6 | TH | Thalamus | 13.98 | |
| 9.74 | |