Annotation Detail for FLYWCH2
Basic Information Top
| Gene Symbol: | FLYWCH2 ( - ) |
|---|---|
| Gene Full Name: | FLYWCH family member 2 |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:114984; OMIM: NA; Uniprot ID:FWCH2_HUMAN; ENSEMBL ID: ENSG00000162076; HGNC ID: 25178 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.534525
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 7 / 564012 | 12 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 32 / 1939121 | 16 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 2 / 263845 | 7 |  |
| glioma | 6 / 106883 | 56 |  |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 46 / 3360307 | 13 | |
| ovarian tumor | 5 / 76682 | 65 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 13 / 1100989 | 11 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 3 / 89626 | 33 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 2 / 24145 | 82 | |
| liver | 1 / 207743 | 4 | |
| lung | 12 / 336974 | 35 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 7 / 102051 | 68 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 6 / 280825 | 21 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 3 / 96619 | 31 | |
| testis | 6 / 330442 | 18 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P417596
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.18 ± 0.9 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.74 ± 0.52 | |
| Basal Part of Pons | 2.97 ± 0.6 | |
| Cerebellar Cortex | 3.31 ± 0.6 | |
| Cerebellar Nuclei | 3.15 ± 0.43 | |
| Claustrum | 3.3 ± 1.04 | |
| Epithalamus | 2.56 ± 0.94 | |
| Frontal Lobe | 2.98 ± 0.88 | |
| Globus Pallidus | 2.88 ± 1.11 | |
| Hypothalamus | 3.28 ± 0.87 | |
| Insula | 2.99 ± 0.86 | |
| Limbic Lobe | 3.06 ± 0.81 | |
| Mesencephalon | 3.05 ± 0.85 | |
| Myelencephalon | 2.96 ± 0.77 | |
| Occipital Lobe | 3.02 ± 0.85 | |
| Parietal Lobe | 3.04 ± 0.86 | |
| Pontine Tegmentum | 3.08 ± 0.61 | |
| Striatum | 2.8 ± 0.9 | |
| Subthalamus | 3.28 ± 0.47 | |
| Temporal Lobe | 2.83 ± 0.8 | |
| Thalamus | 3.05 ± 0.74 | |
| White Matter | 2.6 ± 0.95 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2810417J12Rik | CB | Cerebellum | 24.21 | |
| 31.81 | | |||
| 2810417J12Rik | CTX | Cerebral cortex | 45.66 | |
| 33.68 | | |||
| 2810417J12Rik | HIP | Hippocampal region | 38.26 | |
| 39.25 | | |||
| 2810417J12Rik | HPF | Hippocampal formation | 42.17 | |
| 38.71 | | |||
| 2810417J12Rik | HY | Hypothalamus | 49.36 | |
| 38.47 | | |||
| 2810417J12Rik | LSX | Lateral septal complex | 16.56 | |
| 10.72 | | |||
| 2810417J12Rik | MB | Midbrain | 39.45 | |
| 33.42 | | |||
| 2810417J12Rik | MY | Medulla | 58.48 | |
| 65.85 | | |||
| 2810417J12Rik | OLF | Olfactory bulb | 55.14 | |
| 47.19 | | |||
| 2810417J12Rik | P | Pons | 55.01 | |
| 59.62 | | |||
| 2810417J12Rik | PAL | Pallidum | 38.38 | |
| 36.91 | | |||
| 2810417J12Rik | RHP | Retrohippocampal region | 52.92 | |
| 40.97 | | |||
| 2810417J12Rik | sAMY | Striatum-like amygdalar nuclei | 54.31 | |
| 40.01 | | |||
| 2810417J12Rik | STR | Striatum | 28.54 | |
| 20.69 | | |||
| 2810417J12Rik | STRd | Striatum dorsal region | 22.09 | |
| 15.46 | | |||
| 2810417J12Rik | STRv | Striatum ventral region | 43.18 | |
| 32.18 | | |||
| 2810417J12Rik | TH | Thalamus | 56.14 | |
| 46.82 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00011205 | 34 | 105 | 138 | QDPGTDRTEDSGLAAGPPEAAGENFAPCSVAPGK | Peptide Atlas |