Annotation Detail for HSPA12B
Basic Information Top
| Gene Symbol: | HSPA12B ( C20orf60,FLJ32150,MGC131912,dJ1009E24.2 ) |
|---|---|
| Gene Full Name: | heat shock 70kD protein 12B |
| Band: | 20p13 |
| Quick Links | Entrez ID:116835; OMIM: 610702; Uniprot ID:HS12B_HUMAN; ENSEMBL ID: ENSG00000132622; HGNC ID: 16193 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.516854
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 5 / 564012 | 8 |  |
| neonate | 2 / 31097 | 64 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 26 / 1939121 | 13 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 60 / 3360307 | 17 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 9 / 1100989 | 8 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 6 / 89626 | 66 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 9 / 211777 | 42 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 16 / 280825 | 56 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 6 / 53952 | 111 | |
| stomach | 1 / 96619 | 10 | |
| testis | 3 / 330442 | 9 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P91334
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.49 ± 0.53 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.7 ± 0.32 | |
| Basal Part of Pons | 6.04 ± 0.31 | |
| Cerebellar Cortex | 5.52 ± 0.52 | |
| Cerebellar Nuclei | 6.4 ± 0.45 | |
| Claustrum | 5.22 ± 0.71 | |
| Epithalamus | 5.43 ± 0.7 | |
| Frontal Lobe | 6.06 ± 0.46 | |
| Globus Pallidus | 6.56 ± 0.23 | |
| Hypothalamus | 5.58 ± 0.48 | |
| Insula | 6 ± 0.43 | |
| Limbic Lobe | 5.74 ± 0.57 | |
| Mesencephalon | 6.05 ± 0.48 | |
| Myelencephalon | 6 ± 0.48 | |
| Occipital Lobe | 5.88 ± 0.62 | |
| Parietal Lobe | 5.86 ± 0.47 | |
| Pontine Tegmentum | 5.81 ± 0.59 | |
| Striatum | 6.33 ± 0.37 | |
| Subthalamus | 6.07 ± 0.2 | |
| Temporal Lobe | 5.86 ± 0.39 | |
| Thalamus | 6.07 ± 0.49 | |
| White Matter | 5.85 ± 0.45 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Hspa12b | CB | Cerebellum | 26.49 | |
| 37.01 | | |||
| Hspa12b | CTX | Cerebral cortex | 28.63 | |
| 22.24 | | |||
| Hspa12b | HIP | Hippocampal region | 10.79 | |
| 10.53 | | |||
| Hspa12b | HPF | Hippocampal formation | 15.27 | |
| 13.84 | | |||
| Hspa12b | HY | Hypothalamus | 6.1 | |
| 4.71 | | |||
| Hspa12b | LSX | Lateral septal complex | 4.89 | |
| 3.28 | | |||
| Hspa12b | MB | Midbrain | 10.68 | |
| 9.75 | | |||
| Hspa12b | MY | Medulla | 19.4 | |
| 19.42 | | |||
| Hspa12b | OLF | Olfactory bulb | 29.81 | |
| 24.33 | | |||
| Hspa12b | P | Pons | 8.12 | |
| 8.37 | | |||
| Hspa12b | PAL | Pallidum | 10.91 | |
| 9.83 | | |||
| Hspa12b | RHP | Retrohippocampal region | 22.58 | |
| 18.29 | | |||
| Hspa12b | sAMY | Striatum-like amygdalar nuclei | 3.2 | |
| 2.45 | | |||
| Hspa12b | STR | Striatum | 12.28 | |
| 9.9 | | |||
| Hspa12b | STRd | Striatum dorsal region | 12.41 | |
| 10.56 | | |||
| Hspa12b | STRv | Striatum ventral region | 21.11 | |
| 15.04 | | |||
| Hspa12b | TH | Thalamus | 20.23 | |
| 17.32 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| HS12B_HUMAN_0 | 0 | 0 | 0 | TAGPHRAGALNISLPFSFIDFYRK | PRIDE |
| PAp01048339 | 13 | 523 | 535 | GAVLFGQAPGVVR | Peptide Atlas |