Annotation Detail for ACAP3
Basic Information Top
| Gene Symbol: | ACAP3 ( CENTB5,KIAA1716 ) |
|---|---|
| Gene Full Name: | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 |
| Band: | 1p36.33 |
| Quick Links | Entrez ID:116983; OMIM: NA; Uniprot ID:ACAP3_HUMAN; ENSEMBL ID: ENSG00000131584; HGNC ID: 16754 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.535257
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 6 / 70761 | 84 |  |
| blastocyst | 4 / 62319 | 64 | |
| fetus | 26 / 564012 | 46 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 77 / 1939121 | 39 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 15 / 106883 | 140 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 5 / 68959 | 72 | |
| leukemia | 10 / 95842 | 104 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 1 / 97250 | 10 |  |
| normal | 114 / 3360307 | 33 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 1 / 29757 | 33 | |
| blood | 8 / 123478 | 64 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 51 / 1100989 | 46 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 11 / 215722 | 50 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 13 / 211054 | 61 | |
| heart | 6 / 89626 | 66 | |
| intestine | 11 / 234472 | 46 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 2 / 24145 | 82 | |
| liver | 1 / 207743 | 4 | |
| lung | 9 / 336974 | 26 | |
| lymph | 4 / 44270 | 90 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 11 / 153271 | 71 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 3 / 15768 | 190 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 6 / 210574 | 28 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 7 / 96619 | 72 | |
| testis | 3 / 330442 | 9 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P281497
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.96 ± 0.55 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.31 ± 0.23 | |
| Basal Part of Pons | 8.02 ± 0.47 | |
| Cerebellar Cortex | 8.75 ± 0.35 | |
| Cerebellar Nuclei | 7.57 ± 0.31 | |
| Claustrum | 9.19 ± 0.66 | |
| Epithalamus | 7 ± 0.49 | |
| Frontal Lobe | 7.91 ± 0.56 | |
| Globus Pallidus | 8.11 ± 0.55 | |
| Hypothalamus | 7.6 ± 0.38 | |
| Insula | 8.14 ± 0.66 | |
| Limbic Lobe | 8.68 ± 0.6 | |
| Mesencephalon | 8.24 ± 0.55 | |
| Myelencephalon | 8.29 ± 0.62 | |
| Occipital Lobe | 8.65 ± 0.5 | |
| Parietal Lobe | 8.33 ± 0.69 | |
| Pontine Tegmentum | 8.14 ± 0.56 | |
| Striatum | 8.7 ± 0.71 | |
| Subthalamus | 7.58 ± 0.37 | |
| Temporal Lobe | 8.31 ± 0.58 | |
| Thalamus | 8.06 ± 0.41 | |
| White Matter | 8.97 ± 0.66 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Centb5 | CB | Cerebellum | 32.43 | |
| 39.92 | | |||
| Centb5 | CTX | Cerebral cortex | 91.79 | |
| 73.85 | | |||
| Centb5 | HIP | Hippocampal region | 38.46 | |
| 53.11 | | |||
| Centb5 | HPF | Hippocampal formation | 39.68 | |
| 44.16 | | |||
| Centb5 | HY | Hypothalamus | 4.41 | |
| 3.42 | | |||
| Centb5 | LSX | Lateral septal complex | 8.52 | |
| 5.79 | | |||
| Centb5 | MB | Midbrain | 8.01 | |
| 6.65 | | |||
| Centb5 | MY | Medulla | 16.53 | |
| 16.97 | | |||
| Centb5 | OLF | Olfactory bulb | 49.26 | |
| 39.55 | | |||
| Centb5 | P | Pons | 12.6 | |
| 12.66 | | |||
| Centb5 | PAL | Pallidum | 21.93 | |
| 25.26 | | |||
| Centb5 | RHP | Retrohippocampal region | 41.86 | |
| 32.04 | | |||
| Centb5 | sAMY | Striatum-like amygdalar nuclei | 50.39 | |
| 43.58 | | |||
| Centb5 | STR | Striatum | 45.4 | |
| 35.55 | | |||
| Centb5 | STRd | Striatum dorsal region | 46.53 | |
| 34.88 | | |||
| Centb5 | STRv | Striatum ventral region | 50.11 | |
| 42.41 | | |||
| Centb5 | TH | Thalamus | 21.72 | |
| 19.74 | |