Annotation Detail for GYLTL1B
Basic Information Top
| Gene Symbol: | GYLTL1B ( FLJ35207,LARGE2 ) |
|---|---|
| Gene Full Name: | glycosyltransferase-like 1B |
| Band: | 11p11.2 |
| Quick Links | Entrez ID:120071; OMIM: 609709; Uniprot ID:LARG2_HUMAN; ENSEMBL ID: ENSG00000165905; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.86543
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 5 / 62319 | 80 |  |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 77 / 1939121 | 39 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 4 / 17475 | 228 |  |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 29 / 136302 | 212 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 62 / 3360307 | 18 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 10 / 90257 | 110 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 2 / 1100989 | 1 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 0 / 89626 | 0 | |
| intestine | 8 / 234472 | 34 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 24 / 24145 | 993 | |
| liver | 0 / 207743 | 0 | |
| lung | 2 / 336974 | 5 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 10 / 91610 | 109 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 24 / 280825 | 85 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 5 / 330442 | 15 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_2120_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.14 ± 0.76 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.41 ± 0.24 | |
| Basal Part of Pons | 2.41 ± 0.38 | |
| Cerebellar Cortex | 2.44 ± 0.64 | |
| Cerebellar Nuclei | 2.68 ± 0.51 | |
| Claustrum | 3.2 ± 0.82 | |
| Epithalamus | 2.23 ± 0.83 | |
| Frontal Lobe | 2.74 ± 0.68 | |
| Globus Pallidus | 2.09 ± 0.83 | |
| Hypothalamus | 2.51 ± 0.68 | |
| Insula | 2.77 ± 0.63 | |
| Limbic Lobe | 3.15 ± 0.66 | |
| Mesencephalon | 2.9 ± 0.85 | |
| Myelencephalon | 2.74 ± 0.67 | |
| Occipital Lobe | 2.71 ± 0.73 | |
| Parietal Lobe | 2.72 ± 0.77 | |
| Pontine Tegmentum | 2.82 ± 0.74 | |
| Striatum | 3.23 ± 0.71 | |
| Subthalamus | 2.94 ± 0.28 | |
| Temporal Lobe | 2.8 ± 0.71 | |
| Thalamus | 2.4 ± 0.68 | |
| White Matter | 1.92 ± 0.38 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gyltl1b | CB | Cerebellum | 0.97 | |
| 1.84 | | |||
| Gyltl1b | CTX | Cerebral cortex | 0.48 | |
| 0.81 | | |||
| Gyltl1b | HIP | Hippocampal region | 0.05 | |
| 0.26 | | |||
| Gyltl1b | HPF | Hippocampal formation | 0.04 | |
| 0.15 | | |||
| Gyltl1b | HY | Hypothalamus | 0.05 | |
| 0.07 | | |||
| Gyltl1b | LSX | Lateral septal complex | 0 | |
| 0 | | |||
| Gyltl1b | MB | Midbrain | 0.1 | |
| 0.15 | | |||
| Gyltl1b | MY | Medulla | 0.16 | |
| 0.12 | | |||
| Gyltl1b | OLF | Olfactory bulb | 0.4 | |
| 1.47 | | |||
| Gyltl1b | P | Pons | 0.01 | |
| 0.03 | | |||
| Gyltl1b | PAL | Pallidum | 0.37 | |
| 0.61 | | |||
| Gyltl1b | RHP | Retrohippocampal region | 0.02 | |
| 0.01 | | |||
| Gyltl1b | sAMY | Striatum-like amygdalar nuclei | 0.2 | |
| 0.23 | | |||
| Gyltl1b | STR | Striatum | 0.16 | |
| 0.25 | | |||
| Gyltl1b | STRd | Striatum dorsal region | 0.15 | |
| 0.3 | | |||
| Gyltl1b | STRv | Striatum ventral region | 0.03 | |
| 0.01 | | |||
| Gyltl1b | TH | Thalamus | 0.23 | |
| 0.34 | |