AutismKB 2.0

Annotation Detail for C14orf79


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Basic Information Top
Gene Symbol:C14orf79 ( - )
Gene Full Name: chromosome 14 open reading frame 79
Band: 14q32.33
Quick LinksEntrez ID:122616; OMIM: NA; Uniprot ID:CN079_HUMAN; ENSEMBL ID: ENSG00000140104; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus9 / 56401215
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult21 / 193912110
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor6 / 26384522
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor2 / 9635920
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia2 / 9725020
normal46 / 336030713
ovarian tumor2 / 7668226
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor8 / 12494964
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites1 / 4001524
bladder0 / 297570 
blood0 / 1234780 
bone4 / 7165555
bone marrow1 / 4880120
brain17 / 110098915
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye7 / 21105433
heart3 / 8962633
intestine3 / 23447212
kidney2 / 2117779
larynx0 / 241450 
liver2 / 2077439
lung8 / 33697423
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth2 / 6705229
muscle0 / 1077150 
nerve0 / 157680 
ovary4 / 10205139
pancreas3 / 21481213
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta0 / 2808250 
prostate1 / 1893455
salivary gland0 / 201550 
skin11 / 21057452
spleen0 / 539520 
stomach0 / 966190 
testis9 / 33044227
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213512_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.2
Adipocyte5.05
AdrenalCortex5.3
Adrenalgland4.2
Amygdala5.4
Appendix5.15
AtrioventricularNode3.9
BDCA4+_DentriticCells5.55
Bonemarrow5
BronchialEpithelialCells5
CD105+_Endothelial5.2
CD14+_Monocytes5.4
CD19+_BCells(neg._sel.)5
CD33+_Myeloid6.4
CD34+6.5
CD4+_Tcells5.5
CD56+_NKCells5.6
CD71+_EarlyErythroid4.75
CD8+_Tcells4.85
CardiacMyocytes6.7
Caudatenucleus4.55
Cerebellum4.1
CerebellumPeduncles5.75
CiliaryGanglion3.65
CingulateCortex5.15
Colorectaladenocarcinoma5.1
DorsalRootGanglion3.85
FetalThyroid5.15
Fetalbrain5.1
Fetalliver4.65
Fetallung4.3
GlobusPallidus3.75
Heart6.3
Hypothalamus5.45
Kidney4.1
Leukemia_chronicMyelogenousK-5624.6
Leukemia_promyelocytic-HL-604.25
Leukemialymphoblastic(MOLT-4)3.95
Liver6.7
Lung5.6
Lymphnode4.45
Lymphoma_burkitts(Daudi)6.45
Lymphoma_burkitts(Raji)7
MedullaOblongata4.7
OccipitalLobe4.6
OlfactoryBulb4.05
Ovary3.35
Pancreas4.1
PancreaticIslet5.4
ParietalLobe5.4
Pituitary6
Placenta5.2
Pons5.1
PrefrontalCortex6.4
Prostate5.95
Salivarygland4.15
SkeletalMuscle6.6
Skin3.9
SmoothMuscle5.75
Spinalcord5.45
SubthalamicNucleus4.6
SuperiorCervicalGanglion7.4
TemporalLobe4.65
Testis5.05
TestisGermCell4.25
TestisIntersitial4.25
TestisLeydigCell5
TestisSeminiferousTubule5.4
Thalamus5.15
Thymus4
Thyroid7.25
Tongue4.95
Tonsil4.9
Trachea4.25
TrigeminalGanglion5.85
Uterus4.15
UterusCorpus4.6
WholeBlood5.55
Wholebrain4.35
colon5.1
pineal_day6.54
pineal_night6.24
retina6.175
small_intestine4.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P420981
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.78 ± 0.53
Basal Forebrain3.23 ± 0.77
Basal Part of Pons3.82 ± 0.72
Cerebellar Cortex3.35 ± 0.62
Cerebellar Nuclei3.28 ± 0.7
Claustrum3.72 ± 0.68
Epithalamus4.54 ± 0.79
Frontal Lobe3.91 ± 0.58
Globus Pallidus2.72 ± 0.81
Hypothalamus3.63 ± 0.6
Insula3.93 ± 0.46
Limbic Lobe3.95 ± 0.52
Mesencephalon3.73 ± 0.7
Myelencephalon3.66 ± 0.62
Occipital Lobe3.4 ± 0.63
Parietal Lobe3.67 ± 0.52
Pontine Tegmentum3.75 ± 0.59
Striatum3.5 ± 0.81
Subthalamus3.19 ± 0.78
Temporal Lobe4.01 ± 0.52
Thalamus3.58 ± 0.6
White Matter2.28 ± 0.61
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
BC022687CBCerebellum0.89
2.37
BC022687CTXCerebral cortex10.42
8.36
BC022687HIPHippocampal region7.9
8.9
BC022687HPFHippocampal formation5.78
6.14
BC022687HYHypothalamus2.95
2.91
BC022687LSXLateral septal complex1.47
1.12
BC022687MBMidbrain0.66
2
BC022687MYMedulla0.37
0.66
BC022687OLFOlfactory bulb3.82
4.39
BC022687PPons0.59
1.7
BC022687PALPallidum0.35
0.25
BC022687RHPRetrohippocampal region1.58
1.7
BC022687sAMYStriatum-like amygdalar nuclei2.82
2.16
BC022687STRStriatum1.73
1.42
BC022687STRdStriatum dorsal region1.69
1.45
BC022687STRvStriatum ventral region1.41
1.06
BC022687THThalamus1.99
2.05
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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