AutismKB 2.0

Annotation Detail for PAQR4


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Basic Information Top
Gene Symbol:PAQR4 ( FLJ30002 )
Gene Full Name: progestin and adipoQ receptor family member IV
Band: 16p13.3
Quick LinksEntrez ID:124222; OMIM: NA; Uniprot ID:PAQR4_HUMAN; ENSEMBL ID: ENSG00000162073; HGNC ID: 26386
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus5 / 5640128
neonate1 / 3109732
infant1 / 2362042
juvenile2 / 5555635
adult59 / 193912130
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor7 / 9417874
cervical tumor1 / 3436629
chondrosarcoma2 / 8282324
colorectal tumor6 / 11424652
esophageal tumor0 / 172900 
gastrointestinal tumor12 / 119369100
germ cell tumor19 / 26384572
glioma18 / 106883168
head and neck tumor3 / 13630222
kidney tumor5 / 6895972
leukemia5 / 9584252
liver tumor1 / 9635910
lung tumor5 / 10312748
lymphoma15 / 71755209
non-neoplasia3 / 9725030
normal80 / 336030723
ovarian tumor0 / 766820 
pancreatic tumor26 / 104616248
primitive neuroectodermal tumor of the CNS18 / 125680143
prostate cancer4 / 10268038
retinoblastoma4 / 4635686
skin tumor17 / 124949136
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites3 / 4001574
bladder0 / 297570 
blood11 / 12347889
bone2 / 7165527
bone marrow0 / 488010 
brain57 / 110098951
cervix8 / 48171166
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue5 / 21572223
esophagus0 / 202090 
eye24 / 211054113
heart0 / 896260 
intestine18 / 23447276
kidney5 / 21177723
larynx1 / 2414541
liver1 / 2077434
lung5 / 33697414
lymph7 / 44270158
lymph node6 / 9161065
mammary gland7 / 15327145
mouth0 / 670520 
muscle3 / 10771527
nerve1 / 1576863
ovary5 / 10205148
pancreas26 / 214812121
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta4 / 28082514
prostate8 / 18934542
salivary gland0 / 201550 
skin18 / 21057485
spleen0 / 539520 
stomach11 / 96619113
testis8 / 33044224
thymus1 / 8113112
thyroid2 / 4747342
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus4 / 23287817
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212858_at
Cell line Expression level Expression bar
721_B_lymphoblasts59.75
Adipocyte35.75
AdrenalCortex47.05
Adrenalgland36.5
Amygdala50.65
Appendix39.7
AtrioventricularNode35.2
BDCA4+_DentriticCells25.85
Bonemarrow48
BronchialEpithelialCells38.4
CD105+_Endothelial50.65
CD14+_Monocytes47.9
CD19+_BCells(neg._sel.)33.75
CD33+_Myeloid57.25
CD34+57.3
CD4+_Tcells35.7
CD56+_NKCells38.5
CD71+_EarlyErythroid49.75
CD8+_Tcells28.5
CardiacMyocytes53.95
Caudatenucleus81.15
Cerebellum37.55
CerebellumPeduncles64.6
CiliaryGanglion28.55
CingulateCortex59.45
Colorectaladenocarcinoma69.25
DorsalRootGanglion33.65
FetalThyroid43.25
Fetalbrain47.05
Fetalliver38.85
Fetallung34
GlobusPallidus36.4
Heart58.7
Hypothalamus81.3
Kidney35.15
Leukemia_chronicMyelogenousK-56242.5
Leukemia_promyelocytic-HL-6052.45
Leukemialymphoblastic(MOLT-4)78.4
Liver59.05
Lung49.1
Lymphnode37.55
Lymphoma_burkitts(Daudi)69
Lymphoma_burkitts(Raji)75.35
MedullaOblongata41.45
OccipitalLobe43.4
OlfactoryBulb45.2
Ovary27.9
Pancreas35.4
PancreaticIslet44.75
ParietalLobe51.8
Pituitary49.95
Placenta36.4
Pons50.85
PrefrontalCortex65.6
Prostate76.9
Salivarygland34.7
SkeletalMuscle50
Skin34.45
SmoothMuscle33.7
Spinalcord95.1
SubthalamicNucleus41.75
SuperiorCervicalGanglion52.35
TemporalLobe40.2
Testis38.1
TestisGermCell32.45
TestisIntersitial35.75
TestisLeydigCell38.5
TestisSeminiferousTubule37.65
Thalamus51.7
Thymus45.9
Thyroid51.6
Tongue60.65
Tonsil45.45
Trachea35.65
TrigeminalGanglion34.2
Uterus35.1
UterusCorpus38.5
WholeBlood44.25
Wholebrain51.6
colon43.65
pineal_day56.1
pineal_night53.38
retina159.725
small_intestine40.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P66211
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.94 ± 0.82
Basal Forebrain2.5 ± 0.21
Basal Part of Pons2.94 ± 0.68
Cerebellar Cortex2.67 ± 0.62
Cerebellar Nuclei2.91 ± 0.56
Claustrum2.76 ± 0.58
Epithalamus2.9 ± 0.71
Frontal Lobe2.96 ± 0.67
Globus Pallidus3.06 ± 0.46
Hypothalamus2.55 ± 0.51
Insula2.59 ± 0.6
Limbic Lobe2.7 ± 0.54
Mesencephalon2.87 ± 0.72
Myelencephalon2.85 ± 0.67
Occipital Lobe2.67 ± 0.67
Parietal Lobe2.77 ± 0.63
Pontine Tegmentum2.72 ± 0.61
Striatum2.48 ± 0.65
Subthalamus2.83 ± 0.7
Temporal Lobe2.85 ± 0.61
Thalamus2.83 ± 0.59
White Matter4.58 ± 0.44
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Paqr4CBCerebellum19.16
30.68
Paqr4CTXCerebral cortex53.07
44.21
Paqr4HIPHippocampal region23.71
30.33
Paqr4HPFHippocampal formation33.58
34.39
Paqr4HYHypothalamus20.12
17.21
Paqr4LSXLateral septal complex33.43
27.32
Paqr4MBMidbrain44.56
50.44
Paqr4MYMedulla57
90.1
Paqr4OLFOlfactory bulb54.3
44.78
Paqr4PPons57.93
78.98
Paqr4PALPallidum39.98
40.14
Paqr4RHPRetrohippocampal region45.69
37.94
Paqr4sAMYStriatum-like amygdalar nuclei18.97
17.77
Paqr4STRStriatum31.12
26.63
Paqr4STRdStriatum dorsal region29.09
24.35
Paqr4STRvStriatum ventral region44.11
37.67
Paqr4THThalamus39.76
37.25
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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