Annotation Detail for CYB5D2
Basic Information Top
| Gene Symbol: | CYB5D2 ( MGC32124 ) |
|---|---|
| Gene Full Name: | cytochrome b5 domain containing 2 |
| Band: | 17p13.2 |
| Quick Links | Entrez ID:124936; OMIM: NA; Uniprot ID:NEUFC_HUMAN; ENSEMBL ID: ENSG00000167740; HGNC ID: 28471 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.513871
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 46 / 564012 | 81 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 66 / 1939121 | 34 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 3 / 17290 | 173 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 2 / 263845 | 7 |  |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 131 / 3360307 | 38 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 0 / 29757 | 0 | |
| blood | 4 / 123478 | 32 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 40 / 1100989 | 36 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 3 / 20209 | 148 | |
| eye | 5 / 211054 | 23 | |
| heart | 2 / 89626 | 22 | |
| intestine | 10 / 234472 | 42 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 9 / 207743 | 43 | |
| lung | 14 / 336974 | 41 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 4 / 20539 | 194 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 9 / 189345 | 47 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 7 / 210574 | 33 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 13 / 330442 | 39 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P341392
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.63 ± 0.47 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.95 ± 0.27 | |
| Basal Part of Pons | 8.25 ± 0.27 | |
| Cerebellar Cortex | 7.59 ± 0.17 | |
| Cerebellar Nuclei | 8.24 ± 0.21 | |
| Claustrum | 7.63 ± 0.48 | |
| Epithalamus | 8.59 ± 0.35 | |
| Frontal Lobe | 8.19 ± 0.29 | |
| Globus Pallidus | 8.3 ± 0.26 | |
| Hypothalamus | 8.49 ± 0.22 | |
| Insula | 8.3 ± 0.38 | |
| Limbic Lobe | 7.81 ± 0.49 | |
| Mesencephalon | 7.92 ± 0.33 | |
| Myelencephalon | 7.98 ± 0.41 | |
| Occipital Lobe | 7.49 ± 0.44 | |
| Parietal Lobe | 7.94 ± 0.34 | |
| Pontine Tegmentum | 8.04 ± 0.36 | |
| Striatum | 7.91 ± 0.43 | |
| Subthalamus | 8.16 ± 0.23 | |
| Temporal Lobe | 8.13 ± 0.33 | |
| Thalamus | 7.99 ± 0.3 | |
| White Matter | 8.37 ± 0.18 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cyb5d2 | CB | Cerebellum | 4.5 | |
| 5.76 | | |||
| Cyb5d2 | CTX | Cerebral cortex | 2.97 | |
| 2.17 | | |||
| Cyb5d2 | HIP | Hippocampal region | 3.11 | |
| 2.92 | | |||
| Cyb5d2 | HPF | Hippocampal formation | 2.93 | |
| 2.91 | | |||
| Cyb5d2 | HY | Hypothalamus | 0.36 | |
| 0.43 | | |||
| Cyb5d2 | LSX | Lateral septal complex | 0.52 | |
| 0.6 | | |||
| Cyb5d2 | MB | Midbrain | 0.64 | |
| 1.01 | | |||
| Cyb5d2 | MY | Medulla | 1.62 | |
| 2.13 | | |||
| Cyb5d2 | OLF | Olfactory bulb | 4.25 | |
| 3.93 | | |||
| Cyb5d2 | P | Pons | 0.91 | |
| 1.41 | | |||
| Cyb5d2 | PAL | Pallidum | 1.5 | |
| 1.19 | | |||
| Cyb5d2 | RHP | Retrohippocampal region | 2.38 | |
| 2.85 | | |||
| Cyb5d2 | sAMY | Striatum-like amygdalar nuclei | 2.4 | |
| 1.69 | | |||
| Cyb5d2 | STR | Striatum | 1.89 | |
| 1.37 | | |||
| Cyb5d2 | STRd | Striatum dorsal region | 2.28 | |
| 1.66 | | |||
| Cyb5d2 | STRv | Striatum ventral region | 1.11 | |
| 0.72 | | |||
| Cyb5d2 | TH | Thalamus | 0.94 | |
| 1.04 | |