Annotation Detail for LYPLAL1
Basic Information Top
| Gene Symbol: | LYPLAL1 ( FLJ99730,KIAA1238 ) |
|---|---|
| Gene Full Name: | lysophospholipase-like 1 |
| Band: | 1q41 |
| Quick Links | Entrez ID:127018; OMIM: NA; Uniprot ID:LYPL1_HUMAN; ENSEMBL ID: ENSG00000143353; HGNC ID: 20440 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.657617
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 10 / 564012 | 17 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 51 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 10 / 263845 | 37 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 94 / 3360307 | 27 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 10 / 102680 | 97 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 2 / 123478 | 16 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 27 / 1100989 | 24 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 7 / 211054 | 33 | |
| heart | 7 / 89626 | 78 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 16 / 211777 | 75 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 12 / 336974 | 35 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 11 / 91610 | 120 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 16 / 214812 | 74 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 12 / 189345 | 63 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 6 / 210574 | 28 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 3 / 330442 | 9 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_9307_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.07 ± 0.28 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.26 ± 0.14 | |
| Basal Part of Pons | 8.81 ± 0.2 | |
| Cerebellar Cortex | 9.07 ± 0.21 | |
| Cerebellar Nuclei | 9.07 ± 0.35 | |
| Claustrum | 8.77 ± 0.33 | |
| Epithalamus | 9.39 ± 0.15 | |
| Frontal Lobe | 9.14 ± 0.24 | |
| Globus Pallidus | 9.77 ± 0.14 | |
| Hypothalamus | 9.45 ± 0.17 | |
| Insula | 9.21 ± 0.3 | |
| Limbic Lobe | 9.01 ± 0.3 | |
| Mesencephalon | 9.17 ± 0.25 | |
| Myelencephalon | 9.09 ± 0.3 | |
| Occipital Lobe | 8.82 ± 0.26 | |
| Parietal Lobe | 9.05 ± 0.23 | |
| Pontine Tegmentum | 9.23 ± 0.24 | |
| Striatum | 9.16 ± 0.24 | |
| Subthalamus | 9.3 ± 0.18 | |
| Temporal Lobe | 9.09 ± 0.28 | |
| Thalamus | 9.08 ± 0.26 | |
| White Matter | 9.96 ± 0.35 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Lyplal1 | CB | Cerebellum | 0.18 | |
| 0.56 | | |||
| Lyplal1 | CTX | Cerebral cortex | 0.28 | |
| 0.53 | | |||
| Lyplal1 | HIP | Hippocampal region | 0.25 | |
| 0.25 | | |||
| Lyplal1 | HPF | Hippocampal formation | 0.18 | |
| 0.17 | | |||
| Lyplal1 | HY | Hypothalamus | 0.09 | |
| 0.16 | | |||
| Lyplal1 | LSX | Lateral septal complex | 0.07 | |
| 0.06 | | |||
| Lyplal1 | MB | Midbrain | 0.09 | |
| 0.2 | | |||
| Lyplal1 | MY | Medulla | 0.03 | |
| 0.06 | | |||
| Lyplal1 | OLF | Olfactory bulb | 0.92 | |
| 2.32 | | |||
| Lyplal1 | P | Pons | 0.11 | |
| 0.23 | | |||
| Lyplal1 | PAL | Pallidum | 0.06 | |
| 0.1 | | |||
| Lyplal1 | RHP | Retrohippocampal region | 0.05 | |
| 0.04 | | |||
| Lyplal1 | sAMY | Striatum-like amygdalar nuclei | 0.04 | |
| 0 | | |||
| Lyplal1 | STR | Striatum | 0.06 | |
| 0.07 | | |||
| Lyplal1 | STRd | Striatum dorsal region | 0.07 | |
| 0.09 | | |||
| Lyplal1 | STRv | Striatum ventral region | 0.03 | |
| 0.02 | | |||
| Lyplal1 | TH | Thalamus | 0.22 | |
| 0.34 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| LYPL1_HUMAN_1 | 10 | 1 | 10 | AAASGSVLQR | PRIDE |
| LYPL1_HUMAN_2 | 10 | 2 | 11 | AAASGSVLQR | PRIDE |
| PAp00133593 | 19 | 20 | 38 | HSASLIFLHGSGDSGQGLR | Peptide Atlas |