Annotation Detail for C1orf131
Basic Information Top
| Gene Symbol: | C1orf131 ( DKFZp547B1713 ) |
|---|---|
| Gene Full Name: | chromosome 1 open reading frame 131 |
| Band: | 1q42.2 |
| Quick Links | Entrez ID:128061; OMIM: NA; Uniprot ID:CA131_HUMAN; ENSEMBL ID: ENSG00000143633; HGNC ID: 25332 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.726469
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 11 / 564012 | 19 | |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 |  |
| juvenile | 1 / 55556 | 17 | |
| adult | 30 / 1939121 | 15 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 57 / 3360307 | 16 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 10 / 1100989 | 9 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 1 / 89626 | 11 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 0 / 24145 | 0 | |
| liver | 6 / 207743 | 28 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 3 / 96619 | 31 | |
| testis | 7 / 330442 | 21 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_236_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.62 ± 0.24 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.55 ± 0.3 | |
| Basal Part of Pons | 6.38 ± 0.3 | |
| Cerebellar Cortex | 6.41 ± 0.62 | |
| Cerebellar Nuclei | 6.82 ± 0.38 | |
| Claustrum | 6.54 ± 0.52 | |
| Epithalamus | 6.73 ± 0.66 | |
| Frontal Lobe | 6.39 ± 0.48 | |
| Globus Pallidus | 6.97 ± 0.19 | |
| Hypothalamus | 6.3 ± 0.56 | |
| Insula | 6.29 ± 0.39 | |
| Limbic Lobe | 6.51 ± 0.38 | |
| Mesencephalon | 6.51 ± 0.39 | |
| Myelencephalon | 6.49 ± 0.45 | |
| Occipital Lobe | 6.69 ± 0.58 | |
| Parietal Lobe | 6.45 ± 0.46 | |
| Pontine Tegmentum | 6.48 ± 0.56 | |
| Striatum | 6.65 ± 0.31 | |
| Subthalamus | 6.42 ± 0.47 | |
| Temporal Lobe | 6.36 ± 0.36 | |
| Thalamus | 6.45 ± 0.29 | |
| White Matter | 7.34 ± 0.23 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2810004N23Rik | CB | Cerebellum | 30.32 | |
| 35.84 | | |||
| 2810004N23Rik | CTX | Cerebral cortex | 31.55 | |
| 23.82 | | |||
| 2810004N23Rik | HIP | Hippocampal region | 35.56 | |
| 43.55 | | |||
| 2810004N23Rik | HPF | Hippocampal formation | 34.74 | |
| 35.8 | | |||
| 2810004N23Rik | HY | Hypothalamus | 11.93 | |
| 9.98 | | |||
| 2810004N23Rik | LSX | Lateral septal complex | 3.14 | |
| 2.42 | | |||
| 2810004N23Rik | MB | Midbrain | 13.74 | |
| 12.09 | | |||
| 2810004N23Rik | MY | Medulla | 24.26 | |
| 26.75 | | |||
| 2810004N23Rik | OLF | Olfactory bulb | 29.82 | |
| 24.36 | | |||
| 2810004N23Rik | P | Pons | 17.35 | |
| 17.89 | | |||
| 2810004N23Rik | PAL | Pallidum | 18.42 | |
| 18 | | |||
| 2810004N23Rik | RHP | Retrohippocampal region | 33.56 | |
| 25.9 | | |||
| 2810004N23Rik | sAMY | Striatum-like amygdalar nuclei | 31.18 | |
| 22.46 | | |||
| 2810004N23Rik | STR | Striatum | 17.27 | |
| 13.44 | | |||
| 2810004N23Rik | STRd | Striatum dorsal region | 15.22 | |
| 11.92 | | |||
| 2810004N23Rik | STRv | Striatum ventral region | 21.74 | |
| 16.84 | | |||
| 2810004N23Rik | TH | Thalamus | 30.66 | |
| 25.36 | |