Annotation Detail for APOA1BP
Basic Information Top
| Gene Symbol: | APOA1BP ( AIBP,MGC119143,MGC119144,MGC119145,YJEFN1 ) |
|---|---|
| Gene Full Name: | apolipoprotein A-I binding protein |
| Band: | 1q21 |
| Quick Links | Entrez ID:128240; OMIM: 608862; Uniprot ID:AIBP_HUMAN; ENSEMBL ID: ENSG00000163382; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.528320
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 28 / 564012 | 49 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 72 / 1939121 | 37 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 9 / 94178 | 95 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 8 / 114246 | 70 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 1 / 263845 | 3 |  |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 6 / 95842 | 62 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 6 / 103127 | 58 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 112 / 3360307 | 33 | |
| ovarian tumor | 5 / 76682 | 65 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 7 / 125680 | 55 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 0 / 29757 | 0 | |
| blood | 4 / 123478 | 32 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 46 / 1100989 | 41 | |
| cervix | 8 / 48171 | 166 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 14 / 211054 | 66 | |
| heart | 3 / 89626 | 33 | |
| intestine | 13 / 234472 | 55 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 16 / 336974 | 47 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 10 / 280825 | 35 | |
| prostate | 8 / 189345 | 42 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 8 / 210574 | 37 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 3 / 96619 | 31 | |
| testis | 6 / 330442 | 18 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 11 / 232878 | 47 | |
| vascular | 0 / 51780 | 0 |
- Probe name: CUST_6502_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.46 ± 0.61 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.84 ± 0.15 | |
| Basal Part of Pons | 9.33 ± 0.33 | |
| Cerebellar Cortex | 8.72 ± 0.32 | |
| Cerebellar Nuclei | 9.16 ± 0.25 | |
| Claustrum | 8.35 ± 0.62 | |
| Epithalamus | 9.52 ± 0.45 | |
| Frontal Lobe | 9.15 ± 0.35 | |
| Globus Pallidus | 9.17 ± 0.35 | |
| Hypothalamus | 9.25 ± 0.21 | |
| Insula | 9.12 ± 0.26 | |
| Limbic Lobe | 8.7 ± 0.49 | |
| Mesencephalon | 8.92 ± 0.4 | |
| Myelencephalon | 8.92 ± 0.46 | |
| Occipital Lobe | 8.36 ± 0.44 | |
| Parietal Lobe | 8.89 ± 0.41 | |
| Pontine Tegmentum | 8.82 ± 0.32 | |
| Striatum | 8.7 ± 0.34 | |
| Subthalamus | 9.15 ± 0.1 | |
| Temporal Lobe | 9.07 ± 0.35 | |
| Thalamus | 8.92 ± 0.3 | |
| White Matter | 8.97 ± 0.34 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| AIBP_HUMAN_132 | 12 | 132 | 143 | LFGYEPTIYYPK | PRIDE |
| AIBP_HUMAN_144 | 16 | 144 | 159 | RPNKPLFTALVTQCQK | PRIDE |
| AIBP_HUMAN_208 | 19 | 208 | 226 | GLTVPIASIDIPSGWDVEK | PRIDE |
| AIBP_HUMAN_227 | 18 | 227 | 244 | GNAGGIQPDLLISLTAPK | PRIDE |
| PAp00007355 | 23 | 107 | 129 | SPPTVLVICGPGNNGGDGLVCAR | Peptide Atlas |