Annotation Detail for C22orf25
Basic Information Top
| Gene Symbol: | C22orf25 ( DKFZp761P1121 ) |
|---|---|
| Gene Full Name: | chromosome 22 open reading frame 25 |
| Band: | 22q11.21 |
| Quick Links | Entrez ID:128989; OMIM: NA; Uniprot ID:CV025_HUMAN; ENSEMBL ID: ENSG00000183597; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.474233
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 21 / 564012 | 37 | |
| neonate | 6 / 31097 | 192 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 80 / 1939121 | 41 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 10 / 136302 | 73 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 7 / 103127 | 67 | |
| lymphoma | 6 / 71755 | 83 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 150 / 3360307 | 44 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 |  |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 8 / 124949 | 64 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 20 / 123478 | 161 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 6 / 48801 | 122 | |
| brain | 51 / 1100989 | 46 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 5 / 89626 | 55 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 12 / 336974 | 35 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 6 / 153271 | 39 | |
| mouth | 4 / 67052 | 59 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 17 / 280825 | 60 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 14 / 210574 | 66 | |
| spleen | 5 / 53952 | 92 | |
| stomach | 1 / 96619 | 10 | |
| testis | 11 / 330442 | 33 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 8 / 47473 | 168 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_5860_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.05 ± 0.4 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.64 ± 0.68 | |
| Basal Part of Pons | 6.49 ± 0.44 | |
| Cerebellar Cortex | 6.25 ± 0.34 | |
| Cerebellar Nuclei | 7.07 ± 0.4 | |
| Claustrum | 7.18 ± 0.75 | |
| Epithalamus | 6 ± 0.59 | |
| Frontal Lobe | 6.69 ± 0.59 | |
| Globus Pallidus | 7.61 ± 0.32 | |
| Hypothalamus | 6.57 ± 0.36 | |
| Insula | 6.52 ± 0.43 | |
| Limbic Lobe | 7.07 ± 0.66 | |
| Mesencephalon | 7.11 ± 0.65 | |
| Myelencephalon | 6.85 ± 0.55 | |
| Occipital Lobe | 7.28 ± 0.58 | |
| Parietal Lobe | 6.97 ± 0.58 | |
| Pontine Tegmentum | 6.83 ± 0.41 | |
| Striatum | 6.65 ± 0.66 | |
| Subthalamus | 6.86 ± 0.47 | |
| Temporal Lobe | 6.73 ± 0.51 | |
| Thalamus | 6.92 ± 0.42 | |
| White Matter | 7.48 ± 0.6 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| D16H22S680E | CB | Cerebellum | 15.93 | |
| 22.52 | | |||
| D16H22S680E | CTX | Cerebral cortex | 98.8 | |
| 95.11 | | |||
| D16H22S680E | HIP | Hippocampal region | 70.82 | |
| 83.96 | | |||
| D16H22S680E | HPF | Hippocampal formation | 75.8 | |
| 83.72 | | |||
| D16H22S680E | HY | Hypothalamus | 70.67 | |
| 71.7 | | |||
| D16H22S680E | LSX | Lateral septal complex | 77.36 | |
| 63.08 | | |||
| D16H22S680E | MB | Midbrain | 69.19 | |
| 82.13 | | |||
| D16H22S680E | MY | Medulla | 68.38 | |
| 100 | | |||
| D16H22S680E | OLF | Olfactory bulb | 81.5 | |
| 89.2 | | |||
| D16H22S680E | P | Pons | 64.5 | |
| 94.02 | | |||
| D16H22S680E | PAL | Pallidum | 70.43 | |
| 82.21 | | |||
| D16H22S680E | RHP | Retrohippocampal region | 81.59 | |
| 82.91 | | |||
| D16H22S680E | sAMY | Striatum-like amygdalar nuclei | 68.44 | |
| 65.96 | | |||
| D16H22S680E | STR | Striatum | 46.1 | |
| 39.17 | | |||
| D16H22S680E | STRd | Striatum dorsal region | 39.43 | |
| 32.91 | | |||
| D16H22S680E | STRv | Striatum ventral region | 46.22 | |
| 38.44 | | |||
| D16H22S680E | TH | Thalamus | 75.89 | |
| 76.99 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00159311 | 16 | 20 | 35 | LILAANRDEFYSRPSK | Peptide Atlas |