Annotation Detail for ANKRD54
Basic Information Top
| Gene Symbol: | ANKRD54 ( LIAR ) |
|---|---|
| Gene Full Name: | ankyrin repeat domain 54 |
| Band: | 22q13.1 |
| Quick Links | Entrez ID:129138; OMIM: 613383; Uniprot ID:ANR54_HUMAN; ENSEMBL ID: ENSG00000100124; HGNC ID: 25185 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.135259
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 16 / 564012 | 28 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 67 / 1939121 | 34 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 7 / 94178 | 74 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 102 / 3360307 | 30 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 10 / 125680 | 79 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 9 / 124949 | 72 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 6 / 123478 | 48 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 36 / 1100989 | 32 | |
| cervix | 8 / 48171 | 166 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 1 / 89626 | 11 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 10 / 336974 | 29 | |
| lymph | 4 / 44270 | 90 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 15 / 280825 | 53 | |
| prostate | 11 / 189345 | 58 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 9 / 210574 | 42 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 1 / 96619 | 10 | |
| testis | 10 / 330442 | 30 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 2 / 16999 | 117 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P120921
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.55 ± 0.55 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.48 ± 0.5 | |
| Basal Part of Pons | 4.8 ± 0.48 | |
| Cerebellar Cortex | 4.97 ± 0.41 | |
| Cerebellar Nuclei | 4.45 ± 0.51 | |
| Claustrum | 4.01 ± 0.64 | |
| Epithalamus | 5.38 ± 0.78 | |
| Frontal Lobe | 4.81 ± 0.48 | |
| Globus Pallidus | 4.19 ± 0.5 | |
| Hypothalamus | 4.64 ± 0.57 | |
| Insula | 4.77 ± 0.28 | |
| Limbic Lobe | 4.64 ± 0.52 | |
| Mesencephalon | 4.6 ± 0.43 | |
| Myelencephalon | 4.66 ± 0.55 | |
| Occipital Lobe | 4.46 ± 0.41 | |
| Parietal Lobe | 4.59 ± 0.53 | |
| Pontine Tegmentum | 4.51 ± 0.54 | |
| Striatum | 4.34 ± 0.53 | |
| Subthalamus | 4.78 ± 0.4 | |
| Temporal Lobe | 4.74 ± 0.47 | |
| Thalamus | 4.68 ± 0.5 | |
| White Matter | 4.09 ± 0.32 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ankrd54 | CB | Cerebellum | 58.61 | |
| 57.38 | | |||
| Ankrd54 | CTX | Cerebral cortex | 60.82 | |
| 57.06 | | |||
| Ankrd54 | HIP | Hippocampal region | 68.23 | |
| 70.36 | | |||
| Ankrd54 | HPF | Hippocampal formation | 72.6 | |
| 66.35 | | |||
| Ankrd54 | HY | Hypothalamus | 46.11 | |
| 37.62 | | |||
| Ankrd54 | LSX | Lateral septal complex | 23.69 | |
| 14.92 | | |||
| Ankrd54 | MB | Midbrain | 48.02 | |
| 46.35 | | |||
| Ankrd54 | MY | Medulla | 68.01 | |
| 70.12 | | |||
| Ankrd54 | OLF | Olfactory bulb | 72.05 | |
| 62.34 | | |||
| Ankrd54 | P | Pons | 60.29 | |
| 67.53 | | |||
| Ankrd54 | PAL | Pallidum | 35.24 | |
| 34.93 | | |||
| Ankrd54 | RHP | Retrohippocampal region | 66.83 | |
| 60.63 | | |||
| Ankrd54 | sAMY | Striatum-like amygdalar nuclei | 46.07 | |
| 35.3 | | |||
| Ankrd54 | STR | Striatum | 17.69 | |
| 13.37 | | |||
| Ankrd54 | STRd | Striatum dorsal region | 9.62 | |
| 8.33 | | |||
| Ankrd54 | STRv | Striatum ventral region | 27.65 | |
| 16.75 | | |||
| Ankrd54 | TH | Thalamus | 42.44 | |
| 39.84 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| ANR54_HUMAN_2 | 12 | 2 | 13 | AAAAGDADDEPR | PRIDE |
| PAp00077600 | 18 | 218 | 235 | SKLNILQEGHAQCLEAVR | Peptide Atlas |