Annotation Detail for TMEM18
Basic Information Top
| Gene Symbol: | TMEM18 ( DKFZp434C1714 ) |
|---|---|
| Gene Full Name: | transmembrane protein 18 |
| Band: | 2p25.3 |
| Quick Links | Entrez ID:129787; OMIM: 613220; Uniprot ID:TMM18_HUMAN; ENSEMBL ID: ENSG00000151353; HGNC ID: 25257 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.43899
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 21 / 564012 | 37 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 51 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 3 / 34366 | 87 |  |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 5 / 68959 | 72 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 89 / 3360307 | 26 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 20 / 1100989 | 18 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 6 / 89626 | 66 | |
| intestine | 10 / 234472 | 42 | |
| kidney | 14 / 211777 | 66 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 7 / 336974 | 20 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 8 / 210574 | 37 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 7 / 330442 | 21 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P79599
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.83 ± 0.29 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.96 ± 0.19 | |
| Basal Part of Pons | 9.2 ± 0.22 | |
| Cerebellar Cortex | 8.87 ± 0.2 | |
| Cerebellar Nuclei | 9.3 ± 0.23 | |
| Claustrum | 8.82 ± 0.49 | |
| Epithalamus | 9.49 ± 0.31 | |
| Frontal Lobe | 9.1 ± 0.26 | |
| Globus Pallidus | 9.22 ± 0.3 | |
| Hypothalamus | 9.42 ± 0.26 | |
| Insula | 9.19 ± 0.31 | |
| Limbic Lobe | 8.86 ± 0.34 | |
| Mesencephalon | 8.98 ± 0.35 | |
| Myelencephalon | 9.02 ± 0.35 | |
| Occipital Lobe | 8.67 ± 0.33 | |
| Parietal Lobe | 8.93 ± 0.33 | |
| Pontine Tegmentum | 9.08 ± 0.29 | |
| Striatum | 9.1 ± 0.33 | |
| Subthalamus | 9.3 ± 0.33 | |
| Temporal Lobe | 9.16 ± 0.33 | |
| Thalamus | 8.96 ± 0.26 | |
| White Matter | 10.09 ± 0.1 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tmem18 | CB | Cerebellum | 3.59 | |
| 4.51 | | |||
| Tmem18 | CTX | Cerebral cortex | 20.16 | |
| 14.38 | | |||
| Tmem18 | HIP | Hippocampal region | 18.8 | |
| 19.08 | | |||
| Tmem18 | HPF | Hippocampal formation | 13.33 | |
| 12.58 | | |||
| Tmem18 | HY | Hypothalamus | 5.63 | |
| 3.91 | | |||
| Tmem18 | LSX | Lateral septal complex | 7.16 | |
| 4.37 | | |||
| Tmem18 | MB | Midbrain | 4.2 | |
| 4.28 | | |||
| Tmem18 | MY | Medulla | 4.86 | |
| 5.77 | | |||
| Tmem18 | OLF | Olfactory bulb | 17.8 | |
| 14.76 | | |||
| Tmem18 | P | Pons | 4.3 | |
| 5.93 | | |||
| Tmem18 | PAL | Pallidum | 6.71 | |
| 5.51 | | |||
| Tmem18 | RHP | Retrohippocampal region | 5.52 | |
| 4.72 | | |||
| Tmem18 | sAMY | Striatum-like amygdalar nuclei | 3.36 | |
| 2.59 | | |||
| Tmem18 | STR | Striatum | 5.35 | |
| 3.8 | | |||
| Tmem18 | STRd | Striatum dorsal region | 3.1 | |
| 2.28 | | |||
| Tmem18 | STRv | Striatum ventral region | 14.04 | |
| 9.21 | | |||
| Tmem18 | TH | Thalamus | 8.02 | |
| 6.71 | |