Annotation Detail for ICA1L
Basic Information Top
| Gene Symbol: | ICA1L ( ALS2CR14,ALS2CR15,DKFZp434E1919,MGC138440 ) |
|---|---|
| Gene Full Name: | islet cell autoantigen 1,69kDa-like |
| Band: | 2q33.2 |
| Quick Links | Entrez ID:130026; OMIM: NA; Uniprot ID:ICA1L_HUMAN; ENSEMBL ID: ENSG00000163596; HGNC ID: 14442 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.516629
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 20 / 564012 | 35 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 35 / 1939121 | 18 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 11 / 263845 | 41 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 70 / 3360307 | 20 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 46 / 1100989 | 41 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 2 / 89626 | 22 | |
| intestine | 1 / 234472 | 4 |  |
| kidney | 6 / 211777 | 28 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 14 / 330442 | 42 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P211797
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.99 ± 0.27 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.93 ± 0.27 | |
| Basal Part of Pons | 6.67 ± 0.28 | |
| Cerebellar Cortex | 7.43 ± 0.24 | |
| Cerebellar Nuclei | 6.19 ± 0.38 | |
| Claustrum | 7.2 ± 0.33 | |
| Epithalamus | 7.46 ± 0.42 | |
| Frontal Lobe | 6.88 ± 0.43 | |
| Globus Pallidus | 6.35 ± 0.17 | |
| Hypothalamus | 6.94 ± 0.26 | |
| Insula | 6.98 ± 0.34 | |
| Limbic Lobe | 7.25 ± 0.43 | |
| Mesencephalon | 6.93 ± 0.47 | |
| Myelencephalon | 6.92 ± 0.4 | |
| Occipital Lobe | 7.29 ± 0.37 | |
| Parietal Lobe | 7.07 ± 0.38 | |
| Pontine Tegmentum | 6.95 ± 0.46 | |
| Striatum | 6.68 ± 0.32 | |
| Subthalamus | 6.83 ± 0.12 | |
| Temporal Lobe | 6.97 ± 0.38 | |
| Thalamus | 6.71 ± 0.3 | |
| White Matter | 6.52 ± 0.17 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ica1l | CB | Cerebellum | 1.79 | |
| 1.99 | | |||
| Ica1l | CTX | Cerebral cortex | 5.64 | |
| 4.21 | | |||
| Ica1l | HIP | Hippocampal region | 8.85 | |
| 8.72 | | |||
| Ica1l | HPF | Hippocampal formation | 6.46 | |
| 6.03 | | |||
| Ica1l | HY | Hypothalamus | 0.68 | |
| 0.64 | | |||
| Ica1l | LSX | Lateral septal complex | 2.39 | |
| 1.75 | | |||
| Ica1l | MB | Midbrain | 0.88 | |
| 0.98 | | |||
| Ica1l | MY | Medulla | 5.93 | |
| 7.23 | | |||
| Ica1l | OLF | Olfactory bulb | 3.61 | |
| 2.87 | | |||
| Ica1l | P | Pons | 0.85 | |
| 0.93 | | |||
| Ica1l | PAL | Pallidum | 1.73 | |
| 1.39 | | |||
| Ica1l | RHP | Retrohippocampal region | 2.04 | |
| 1.95 | | |||
| Ica1l | sAMY | Striatum-like amygdalar nuclei | 2.17 | |
| 1.43 | | |||
| Ica1l | STR | Striatum | 1.71 | |
| 1.37 | | |||
| Ica1l | STRd | Striatum dorsal region | 1.27 | |
| 1.13 | | |||
| Ica1l | STRv | Striatum ventral region | 2.63 | |
| 1.88 | | |||
| Ica1l | TH | Thalamus | 1.57 | |
| 1.54 | |