Annotation Detail for GALM
Basic Information Top
| Gene Symbol: | GALM ( IBD1 ) |
|---|---|
| Gene Full Name: | galactose mutarotase (aldose 1-epimerase) |
| Band: | 2p22.1 |
| Quick Links | Entrez ID:130589; OMIM: 608883; Uniprot ID:GALM_HUMAN; ENSEMBL ID: ENSG00000143891; HGNC ID: 24063 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.435012
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 10 / 564012 | 17 | |
| neonate | 5 / 31097 | 160 |  |
| infant | 1 / 23620 | 42 | |
| juvenile | 7 / 55556 | 125 | |
| adult | 42 / 1939121 | 21 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 7 / 114246 | 61 | |
| esophageal tumor | 2 / 17290 | 115 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 12 / 263845 | 45 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 7 / 96359 | 72 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 6 / 97250 | 61 | |
| normal | 134 / 3360307 | 39 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 12 / 125680 | 95 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 10 / 33197 | 301 |  |
| ascites | 2 / 40015 | 49 | |
| bladder | 4 / 29757 | 134 | |
| blood | 5 / 123478 | 40 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 20 / 1100989 | 18 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 11 / 149255 | 73 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 3 / 211054 | 14 | |
| heart | 2 / 89626 | 22 | |
| intestine | 23 / 234472 | 98 | |
| kidney | 41 / 211777 | 193 | |
| larynx | 0 / 24145 | 0 | |
| liver | 11 / 207743 | 52 | |
| lung | 10 / 336974 | 29 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 6 / 280825 | 21 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 6 / 210574 | 28 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 5 / 96619 | 51 | |
| testis | 6 / 330442 | 18 | |
| thymus | 7 / 81131 | 86 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 8 / 232878 | 34 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_24_P212539
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.03 ± 0.68 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.17 ± 0.25 | |
| Basal Part of Pons | 2.48 ± 0.5 | |
| Cerebellar Cortex | 2.46 ± 0.65 | |
| Cerebellar Nuclei | 2.7 ± 0.48 | |
| Claustrum | 3.56 ± 0.74 | |
| Epithalamus | 3.04 ± 0.35 | |
| Frontal Lobe | 3.06 ± 0.64 | |
| Globus Pallidus | 3.35 ± 0.34 | |
| Hypothalamus | 2.39 ± 0.74 | |
| Insula | 3.15 ± 0.61 | |
| Limbic Lobe | 3.07 ± 0.78 | |
| Mesencephalon | 2.69 ± 0.71 | |
| Myelencephalon | 2.98 ± 0.75 | |
| Occipital Lobe | 2.52 ± 0.91 | |
| Parietal Lobe | 2.95 ± 0.77 | |
| Pontine Tegmentum | 2.9 ± 0.64 | |
| Striatum | 2.51 ± 0.83 | |
| Subthalamus | 2.93 ± 0.64 | |
| Temporal Lobe | 2.91 ± 0.75 | |
| Thalamus | 3.56 ± 0.72 | |
| White Matter | 2.5 ± 0.43 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Galm | CB | Cerebellum | 3.25 | |
| 2.5 | | |||
| Galm | CTX | Cerebral cortex | 0.68 | |
| 0.56 | | |||
| Galm | HIP | Hippocampal region | 1.46 | |
| 0.93 | | |||
| Galm | HPF | Hippocampal formation | 1.18 | |
| 0.81 | | |||
| Galm | HY | Hypothalamus | 0.69 | |
| 0.48 | | |||
| Galm | LSX | Lateral septal complex | 0.33 | |
| 0.19 | | |||
| Galm | MB | Midbrain | 0.48 | |
| 0.58 | | |||
| Galm | MY | Medulla | 0.81 | |
| 0.64 | | |||
| Galm | OLF | Olfactory bulb | 1.63 | |
| 1.04 | | |||
| Galm | P | Pons | 1.4 | |
| 1.47 | | |||
| Galm | PAL | Pallidum | 0.72 | |
| 0.72 | | |||
| Galm | RHP | Retrohippocampal region | 0.72 | |
| 0.62 | | |||
| Galm | sAMY | Striatum-like amygdalar nuclei | 0.12 | |
| 0.1 | | |||
| Galm | STR | Striatum | 0.64 | |
| 0.41 | | |||
| Galm | STRd | Striatum dorsal region | 0.54 | |
| 0.36 | | |||
| Galm | STRv | Striatum ventral region | 1.46 | |
| 0.78 | | |||
| Galm | TH | Thalamus | 0.43 | |
| 0.28 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| GALM_HUMAN_0 | 0 | 0 | 0 | ASDVVLGFAELEGYLQK | PRIDE |
| GALM_HUMAN_0 | 0 | 0 | 0 | AVFGELPSGGGTVEK | PRIDE |
| PAp00003433 | 17 | 233 | 249 | HLQDFHLNGFDHNFCLK | Peptide Atlas |