AutismKB 2.0

Annotation Detail for FAM43A


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Basic Information Top
Gene Symbol:FAM43A ( FLJ90022 )
Gene Full Name: family with sequence similarity 43, member A
Band: 3q29
Quick LinksEntrez ID:131583; OMIM: NA; Uniprot ID:FA43A_HUMAN; ENSEMBL ID: ENSG00000185112; HGNC ID: 26888
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_226_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.6 ± 0.97
Basal Forebrain2.09 ± 0.44
Basal Part of Pons2.15 ± 0.79
Cerebellar Cortex1.92 ± 0.71
Cerebellar Nuclei2.22 ± 0.73
Claustrum2.89 ± 0.89
Epithalamus1.59 ± 0.68
Frontal Lobe2.02 ± 0.78
Globus Pallidus2.49 ± 0.6
Hypothalamus2.17 ± 0.47
Insula2.01 ± 0.62
Limbic Lobe2.15 ± 0.75
Mesencephalon2.3 ± 0.66
Myelencephalon2.17 ± 0.74
Occipital Lobe2.32 ± 0.96
Parietal Lobe2.11 ± 0.66
Pontine Tegmentum2.02 ± 0.8
Striatum2.34 ± 0.77
Subthalamus2.24 ± 0.47
Temporal Lobe2.03 ± 0.8
Thalamus2.14 ± 0.81
White Matter2.44 ± 0.47
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
BC022623CBCerebellum13.17
18.19
BC022623CTXCerebral cortex29.08
22.32
BC022623HIPHippocampal region13.83
16.14
BC022623HPFHippocampal formation15.53
15.58
BC022623HYHypothalamus5.91
5.16
BC022623LSXLateral septal complex3.64
2.96
BC022623MBMidbrain8.16
8.82
BC022623MYMedulla17.19
24.55
BC022623OLFOlfactory bulb15.35
12.77
BC022623PPons20.12
26.31
BC022623PALPallidum8.58
8.16
BC022623RHPRetrohippocampal region17.87
14.7
BC022623sAMYStriatum-like amygdalar nuclei14.27
10.75
BC022623STRStriatum8.93
6.79
BC022623STRdStriatum dorsal region8.21
6.36
BC022623STRvStriatum ventral region8.29
5.77
BC022623THThalamus9.91
11.12
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018