Annotation Detail for NUDT16
Basic Information Top
| Gene Symbol: | NUDT16 ( FLJ31265,FLJ34034,FLJ36248 ) |
|---|---|
| Gene Full Name: | nudix (nucleoside diphosphate linked moiety X)-type motif 16 |
| Band: | 3q22.1 |
| Quick Links | Entrez ID:131870; OMIM: NA; Uniprot ID:NUD16_HUMAN; ENSEMBL ID: ENSG00000198585; HGNC ID: 26442 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.282050
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 26 / 564012 | 46 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 95 / 1939121 | 48 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 14 / 94178 | 148 |  |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 10 / 263845 | 37 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 130 / 3360307 | 38 | |
| ovarian tumor | 7 / 76682 | 91 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 5 / 123478 | 40 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 55 / 1100989 | 49 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 12 / 211054 | 56 | |
| heart | 2 / 89626 | 22 | |
| intestine | 8 / 234472 | 34 | |
| kidney | 22 / 211777 | 103 | |
| larynx | 1 / 24145 | 41 | |
| liver | 4 / 207743 | 19 | |
| lung | 8 / 336974 | 23 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 15 / 153271 | 97 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 3 / 15768 | 190 | |
| ovary | 7 / 102051 | 68 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 10 / 189345 | 52 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 2 / 96619 | 20 | |
| testis | 1 / 330442 | 3 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 5 / 47473 | 105 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_32_P127052
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.78 ± 0.53 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.09 ± 0.15 | |
| Basal Part of Pons | 7.5 ± 0.38 | |
| Cerebellar Cortex | 7.11 ± 0.19 | |
| Cerebellar Nuclei | 7.59 ± 0.29 | |
| Claustrum | 7.07 ± 0.56 | |
| Epithalamus | 7.3 ± 0.49 | |
| Frontal Lobe | 7.51 ± 0.36 | |
| Globus Pallidus | 7.22 ± 0.52 | |
| Hypothalamus | 7.62 ± 0.61 | |
| Insula | 7.54 ± 0.29 | |
| Limbic Lobe | 7.08 ± 0.56 | |
| Mesencephalon | 7.17 ± 0.5 | |
| Myelencephalon | 7.19 ± 0.54 | |
| Occipital Lobe | 6.65 ± 0.57 | |
| Parietal Lobe | 7.23 ± 0.45 | |
| Pontine Tegmentum | 7.3 ± 0.56 | |
| Striatum | 6.39 ± 0.46 | |
| Subthalamus | 7.54 ± 0.56 | |
| Temporal Lobe | 7.47 ± 0.42 | |
| Thalamus | 7.3 ± 0.44 | |
| White Matter | 7.03 ± 0.34 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Nudt16 | CB | Cerebellum | 1.12 | |
| 1.31 | | |||
| Nudt16 | CTX | Cerebral cortex | 2.43 | |
| 1.69 | | |||
| Nudt16 | HIP | Hippocampal region | 0.79 | |
| 1.25 | | |||
| Nudt16 | HPF | Hippocampal formation | 0.75 | |
| 0.8 | | |||
| Nudt16 | HY | Hypothalamus | 0.26 | |
| 0.13 | | |||
| Nudt16 | LSX | Lateral septal complex | 0.25 | |
| 0.13 | | |||
| Nudt16 | MB | Midbrain | 1.01 | |
| 1.22 | | |||
| Nudt16 | MY | Medulla | 4.63 | |
| 5.28 | | |||
| Nudt16 | OLF | Olfactory bulb | 3.63 | |
| 2.25 | | |||
| Nudt16 | P | Pons | 2.5 | |
| 2.8 | | |||
| Nudt16 | PAL | Pallidum | 0.47 | |
| 0.19 | | |||
| Nudt16 | RHP | Retrohippocampal region | 0.72 | |
| 0.21 | | |||
| Nudt16 | sAMY | Striatum-like amygdalar nuclei | 0.7 | |
| 0.44 | | |||
| Nudt16 | STR | Striatum | 0.71 | |
| 0.43 | | |||
| Nudt16 | STRd | Striatum dorsal region | 0.79 | |
| 0.47 | | |||
| Nudt16 | STRv | Striatum ventral region | 0.68 | |
| 0.43 | | |||
| Nudt16 | TH | Thalamus | 0.28 | |
| 0.32 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| NUD16_HUMAN_0 | 0 | 0 | 0 | DGVGGLPTFLENSFIGSAR | PRIDE |
| NUD16_HUMAN_0 | 0 | 0 | 0 | EQLLEALQDLGLLQSGSISGLK | PRIDE |
| NUD16_HUMAN_168 | 22 | 168 | 189 | EQLLEALQDLGLLQSGSISGLK | PRIDE |