Annotation Detail for AASDH
Basic Information Top
| Gene Symbol: | AASDH ( ACSF4,LYS2,NRPS1098,NRPS998 ) |
|---|---|
| Gene Full Name: | aminoadipate-semialdehyde dehydrogenase |
| Band: | 4q12 |
| Quick Links | Entrez ID:132949; OMIM: NA; Uniprot ID:ACSF4_HUMAN; ENSEMBL ID: ENSG00000157426; HGNC ID: 23993 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.104347
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 21 / 564012 | 37 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 28 / 1939121 | 14 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 |  |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 2 / 263845 | 7 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 69 / 3360307 | 20 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 1 / 29757 | 33 | |
| blood | 2 / 123478 | 16 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 19 / 1100989 | 17 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 0 / 89626 | 0 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 9 / 336974 | 26 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 4 / 330442 | 12 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 7 / 52413 | 133 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P383076
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.82 ± 0.42 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.68 ± 0.35 | |
| Basal Part of Pons | 5.73 ± 0.38 | |
| Cerebellar Cortex | 5.96 ± 0.23 | |
| Cerebellar Nuclei | 5.64 ± 0.29 | |
| Claustrum | 5.51 ± 0.81 | |
| Epithalamus | 6.12 ± 0.26 | |
| Frontal Lobe | 5.48 ± 0.41 | |
| Globus Pallidus | 5.91 ± 0.33 | |
| Hypothalamus | 5.77 ± 0.4 | |
| Insula | 5.48 ± 0.31 | |
| Limbic Lobe | 5.48 ± 0.39 | |
| Mesencephalon | 5.67 ± 0.5 | |
| Myelencephalon | 5.59 ± 0.43 | |
| Occipital Lobe | 5.91 ± 0.34 | |
| Parietal Lobe | 5.67 ± 0.4 | |
| Pontine Tegmentum | 5.68 ± 0.41 | |
| Striatum | 5.42 ± 0.51 | |
| Subthalamus | 5.64 ± 0.5 | |
| Temporal Lobe | 5.61 ± 0.3 | |
| Thalamus | 5.54 ± 0.37 | |
| White Matter | 6.28 ± 0.28 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| A230062G08Rik | CB | Cerebellum | 10.54 | |
| 10.96 | | |||
| A230062G08Rik | CTX | Cerebral cortex | 6.79 | |
| 4.32 | | |||
| A230062G08Rik | HIP | Hippocampal region | 9.97 | |
| 10.31 | | |||
| A230062G08Rik | HPF | Hippocampal formation | 10.92 | |
| 9.6 | | |||
| A230062G08Rik | HY | Hypothalamus | 0.89 | |
| 0.57 | | |||
| A230062G08Rik | LSX | Lateral septal complex | 0.78 | |
| 0.45 | | |||
| A230062G08Rik | MB | Midbrain | 1.69 | |
| 1.34 | | |||
| A230062G08Rik | MY | Medulla | 2.6 | |
| 2.85 | | |||
| A230062G08Rik | OLF | Olfactory bulb | 8 | |
| 5.34 | | |||
| A230062G08Rik | P | Pons | 1.96 | |
| 1.84 | | |||
| A230062G08Rik | PAL | Pallidum | 0.8 | |
| 0.62 | | |||
| A230062G08Rik | RHP | Retrohippocampal region | 12.93 | |
| 8.88 | | |||
| A230062G08Rik | sAMY | Striatum-like amygdalar nuclei | 3.3 | |
| 2.07 | | |||
| A230062G08Rik | STR | Striatum | 1.4 | |
| 0.92 | | |||
| A230062G08Rik | STRd | Striatum dorsal region | 1.21 | |
| 0.82 | | |||
| A230062G08Rik | STRv | Striatum ventral region | 1.29 | |
| 0.82 | | |||
| A230062G08Rik | TH | Thalamus | 2.65 | |
| 2.06 | |