Annotation Detail for JMY
Basic Information Top
| Gene Symbol: | JMY ( FLJ37870,MGC163496,WHDC1L3 ) |
|---|---|
| Gene Full Name: | junction mediating and regulatory protein, p53 cofactor |
| Band: | 5q14.1 |
| Quick Links | Entrez ID:133746; OMIM: 604279; Uniprot ID:JMY_HUMAN; ENSEMBL ID: ENSG00000152409; HGNC ID: 28916 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.482605
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 18 / 564012 | 31 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 60 / 1939121 | 30 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 2 / 263845 | 7 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 98 / 3360307 | 29 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 2 / 123478 | 16 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 22 / 1100989 | 19 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 6 / 211054 | 28 | |
| heart | 0 / 89626 | 0 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 1 / 24145 | 41 | |
| liver | 6 / 207743 | 28 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 5 / 96619 | 51 | |
| testis | 11 / 330442 | 33 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 5 / 52413 | 95 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_32_P169243
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.54 ± 0.33 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.75 ± 0.3 | |
| Basal Part of Pons | 4.9 ± 0.43 | |
| Cerebellar Cortex | 3.99 ± 0.36 | |
| Cerebellar Nuclei | 3.9 ± 0.63 | |
| Claustrum | 5.35 ± 0.6 | |
| Epithalamus | 3.69 ± 0.56 | |
| Frontal Lobe | 4.71 ± 0.73 | |
| Globus Pallidus | 2.71 ± 0.53 | |
| Hypothalamus | 3.49 ± 0.61 | |
| Insula | 4.38 ± 0.6 | |
| Limbic Lobe | 4.66 ± 0.76 | |
| Mesencephalon | 4.08 ± 0.63 | |
| Myelencephalon | 4.35 ± 0.74 | |
| Occipital Lobe | 4.17 ± 0.66 | |
| Parietal Lobe | 4.16 ± 0.65 | |
| Pontine Tegmentum | 4.3 ± 0.64 | |
| Striatum | 5.13 ± 0.5 | |
| Subthalamus | 4.02 ± 0.13 | |
| Temporal Lobe | 4.39 ± 0.68 | |
| Thalamus | 4.04 ± 0.6 | |
| White Matter | 3.05 ± 0.64 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Jmy | CB | Cerebellum | 2.45 | |
| 1.98 | | |||
| Jmy | CTX | Cerebral cortex | 3.7 | |
| 1.1 | | |||
| Jmy | HIP | Hippocampal region | 3.56 | |
| 2.26 | | |||
| Jmy | HPF | Hippocampal formation | 3 | |
| 1.65 | | |||
| Jmy | HY | Hypothalamus | 1.38 | |
| 0.44 | | |||
| Jmy | LSX | Lateral septal complex | 0.27 | |
| 0.11 | | |||
| Jmy | MB | Midbrain | 1.9 | |
| 1.26 | | |||
| Jmy | MY | Medulla | 7.32 | |
| 4.01 | | |||
| Jmy | OLF | Olfactory bulb | 6.67 | |
| 3 | | |||
| Jmy | P | Pons | 5.58 | |
| 2.65 | | |||
| Jmy | PAL | Pallidum | 2.54 | |
| 0.79 | | |||
| Jmy | RHP | Retrohippocampal region | 2.24 | |
| 0.94 | | |||
| Jmy | sAMY | Striatum-like amygdalar nuclei | 1.36 | |
| 0.52 | | |||
| Jmy | STR | Striatum | 1.05 | |
| 0.39 | | |||
| Jmy | STRd | Striatum dorsal region | 0.88 | |
| 0.34 | | |||
| Jmy | STRv | Striatum ventral region | 1.62 | |
| 0.53 | | |||
| Jmy | TH | Thalamus | 2.34 | |
| 0.99 | |