Annotation Detail for POC5
Basic Information Top
| Gene Symbol: | POC5 ( C5orf37,FLJ35779,MGC120442,MGC120443,MGC120444 ) |
|---|---|
| Gene Full Name: | POC5 centriolar protein homolog (Chlamydomonas) |
| Band: | 5q13.3 |
| Quick Links | Entrez ID:134359; OMIM: NA; Uniprot ID:POC5_HUMAN; ENSEMBL ID: ENSG00000152359; HGNC ID: 26658 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.432726
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 3 / 62319 | 48 | |
| fetus | 18 / 564012 | 31 | |
| neonate | 2 / 31097 | 64 |  |
| infant | 1 / 23620 | 42 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 127 / 1939121 | 65 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 3 / 17290 | 173 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 93 / 3360307 | 27 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 |  |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 93 / 102680 | 905 |  |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 20 / 1100989 | 18 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 3 / 20209 | 148 | |
| eye | 5 / 211054 | 23 | |
| heart | 0 / 89626 | 0 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 5 / 91610 | 54 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 93 / 189345 | 491 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 2 / 96619 | 20 | |
| testis | 21 / 330442 | 63 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P413803
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.34 ± 0.54 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.29 ± 0.4 | |
| Basal Part of Pons | 4.49 ± 0.39 | |
| Cerebellar Cortex | 4.67 ± 0.3 | |
| Cerebellar Nuclei | 4.58 ± 0.32 | |
| Claustrum | 4 ± 0.57 | |
| Epithalamus | 4.24 ± 0.4 | |
| Frontal Lobe | 4.34 ± 0.45 | |
| Globus Pallidus | 4.62 ± 0.28 | |
| Hypothalamus | 4.64 ± 0.47 | |
| Insula | 4.11 ± 0.47 | |
| Limbic Lobe | 4.27 ± 0.58 | |
| Mesencephalon | 4.38 ± 0.51 | |
| Myelencephalon | 4.32 ± 0.52 | |
| Occipital Lobe | 4.29 ± 0.47 | |
| Parietal Lobe | 4.23 ± 0.49 | |
| Pontine Tegmentum | 4.39 ± 0.44 | |
| Striatum | 4.58 ± 0.48 | |
| Subthalamus | 4.4 ± 0.19 | |
| Temporal Lobe | 4.28 ± 0.43 | |
| Thalamus | 4.23 ± 0.55 | |
| White Matter | 5.63 ± 0.47 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 1200014M14Rik | CB | Cerebellum | 12.89 | |
| 16.27 | | |||
| 1200014M14Rik | CTX | Cerebral cortex | 14.1 | |
| 11.52 | | |||
| 1200014M14Rik | HIP | Hippocampal region | 23.25 | |
| 29.88 | | |||
| 1200014M14Rik | HPF | Hippocampal formation | 22.57 | |
| 25.48 | | |||
| 1200014M14Rik | HY | Hypothalamus | 4.2 | |
| 3.6 | | |||
| 1200014M14Rik | LSX | Lateral septal complex | 0.18 | |
| 0.23 | | |||
| 1200014M14Rik | MB | Midbrain | 3.91 | |
| 4.64 | | |||
| 1200014M14Rik | MY | Medulla | 24.15 | |
| 28.97 | | |||
| 1200014M14Rik | OLF | Olfactory bulb | 35.76 | |
| 31.05 | | |||
| 1200014M14Rik | P | Pons | 15.02 | |
| 18.07 | | |||
| 1200014M14Rik | PAL | Pallidum | 5.7 | |
| 6.15 | | |||
| 1200014M14Rik | RHP | Retrohippocampal region | 21.59 | |
| 18.29 | | |||
| 1200014M14Rik | sAMY | Striatum-like amygdalar nuclei | 19.64 | |
| 14.42 | | |||
| 1200014M14Rik | STR | Striatum | 10.54 | |
| 8.55 | | |||
| 1200014M14Rik | STRd | Striatum dorsal region | 9.3 | |
| 7.85 | | |||
| 1200014M14Rik | STRv | Striatum ventral region | 17.77 | |
| 13.4 | | |||
| 1200014M14Rik | TH | Thalamus | 5.02 | |
| 4.64 | |