Annotation Detail for WDR36
Basic Information Top
| Gene Symbol: | WDR36 ( DKFZp686I1650,GLC1G,TA-WDRP,TAWDRP,UTP21 ) |
|---|---|
| Gene Full Name: | WD repeat domain 36 |
| Band: | 5q22.1 |
| Quick Links | Entrez ID:134430; OMIM: 609669; Uniprot ID:WDR36_HUMAN; ENSEMBL ID: ENSG00000134987; HGNC ID: 30696 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.533237
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 6 / 62319 | 96 | |
| fetus | 21 / 564012 | 37 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 55 / 1939121 | 28 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 16 / 263845 | 60 | |
| glioma | 1 / 106883 | 9 |  |
| head and neck tumor | 7 / 136302 | 51 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 104 / 3360307 | 30 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 9 / 124949 | 72 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 2 / 29757 | 67 | |
| blood | 3 / 123478 | 24 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 21 / 1100989 | 19 | |
| cervix | 5 / 48171 | 103 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 16 / 215722 | 74 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 2 / 89626 | 22 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 1 / 24145 | 41 | |
| liver | 3 / 207743 | 14 | |
| lung | 4 / 336974 | 11 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 5 / 67052 | 74 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 12 / 280825 | 42 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 12 / 210574 | 56 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 11 / 330442 | 33 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_24_P106357
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.86 ± 0.69 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.76 ± 0.46 | |
| Basal Part of Pons | 3.76 ± 0.48 | |
| Cerebellar Cortex | 4.29 ± 0.27 | |
| Cerebellar Nuclei | 4.16 ± 0.41 | |
| Claustrum | 3.66 ± 0.83 | |
| Epithalamus | 4.03 ± 0.63 | |
| Frontal Lobe | 4.14 ± 0.49 | |
| Globus Pallidus | 3.73 ± 1.3 | |
| Hypothalamus | 4.48 ± 0.5 | |
| Insula | 4.21 ± 0.41 | |
| Limbic Lobe | 3.8 ± 0.64 | |
| Mesencephalon | 4.31 ± 0.57 | |
| Myelencephalon | 4.04 ± 0.63 | |
| Occipital Lobe | 3.73 ± 0.66 | |
| Parietal Lobe | 4.06 ± 0.67 | |
| Pontine Tegmentum | 3.98 ± 0.56 | |
| Striatum | 3.65 ± 0.63 | |
| Subthalamus | 4.11 ± 0.77 | |
| Temporal Lobe | 4.13 ± 0.44 | |
| Thalamus | 4 ± 0.58 | |
| White Matter | 2.94 ± 0.66 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Wdr36 | CB | Cerebellum | 25.24 | |
| 31.2 | | |||
| Wdr36 | CTX | Cerebral cortex | 31.55 | |
| 20.92 | | |||
| Wdr36 | HIP | Hippocampal region | 25.88 | |
| 29.14 | | |||
| Wdr36 | HPF | Hippocampal formation | 26.62 | |
| 25.06 | | |||
| Wdr36 | HY | Hypothalamus | 10.46 | |
| 7.92 | | |||
| Wdr36 | LSX | Lateral septal complex | 11.46 | |
| 8.01 | | |||
| Wdr36 | MB | Midbrain | 14.74 | |
| 12.93 | | |||
| Wdr36 | MY | Medulla | 20.88 | |
| 20.01 | | |||
| Wdr36 | OLF | Olfactory bulb | 29.81 | |
| 23.69 | | |||
| Wdr36 | P | Pons | 16.71 | |
| 15.64 | | |||
| Wdr36 | PAL | Pallidum | 15.32 | |
| 12.38 | | |||
| Wdr36 | RHP | Retrohippocampal region | 28.41 | |
| 20.3 | | |||
| Wdr36 | sAMY | Striatum-like amygdalar nuclei | 12.49 | |
| 8.94 | | |||
| Wdr36 | STR | Striatum | 16.81 | |
| 11.59 | | |||
| Wdr36 | STRd | Striatum dorsal region | 17.21 | |
| 12.07 | | |||
| Wdr36 | STRv | Striatum ventral region | 20.73 | |
| 13.14 | | |||
| Wdr36 | TH | Thalamus | 24.92 | |
| 20.86 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00069049 | 21 | 544 | 564 | GVAVDGLNQLTVTTGSEGLLK | Peptide Atlas |