AutismKB 2.0

Annotation Detail for COX7A1


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Basic Information Top
Gene Symbol:COX7A1 ( COX7A,COX7AH,COX7AM )
Gene Full Name: cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)
Band: 19q13.12
Quick LinksEntrez ID:1346; OMIM: 123995; Uniprot ID:CX7A1_HUMAN; ENSEMBL ID: ENSG00000161281; HGNC ID: 2287
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst2 / 6231932
fetus13 / 56401223
neonate2 / 3109764
infant0 / 236200 
juvenile0 / 555560 
adult175 / 193912190
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor2 / 2638457
glioma3 / 10688328
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal218 / 336030764
ovarian tumor0 / 766820 
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow0 / 488010 
brain10 / 11009899
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye6 / 21105428
heart19 / 89626211
intestine2 / 2344728
kidney6 / 21177728
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth4 / 6705259
muscle154 / 1077151429
nerve0 / 157680 
ovary0 / 1020510 
pancreas3 / 21481213
parathyroid4 / 20539194
pharynx0 / 413280 
pituitary gland3 / 16585180
placenta0 / 2808250 
prostate12 / 18934563
salivary gland0 / 201550 
skin1 / 2105744
spleen1 / 5395218
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord2 / 13680146
uterus2 / 2328788
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204570_at
Cell line Expression level Expression bar
721_B_lymphoblasts19.75
Adipocyte161.6
AdrenalCortex64
Adrenalgland161.05
Amygdala63.4
Appendix57.95
AtrioventricularNode20.05
BDCA4+_DentriticCells10.15
Bonemarrow17.9
BronchialEpithelialCells10.6
CD105+_Endothelial15.95
CD14+_Monocytes16.2
CD19+_BCells(neg._sel.)13.05
CD33+_Myeloid14.35
CD34+14.75
CD4+_Tcells12.75
CD56+_NKCells14.65
CD71+_EarlyErythroid18.35
CD8+_Tcells11.45
CardiacMyocytes30.85
Caudatenucleus36.5
Cerebellum44.95
CerebellumPeduncles50.65
CiliaryGanglion30.05
CingulateCortex106.05
Colorectaladenocarcinoma9.05
DorsalRootGanglion23
FetalThyroid149.55
Fetalbrain19.15
Fetalliver12.35
Fetallung47
GlobusPallidus52.5
Heart6904.55
Hypothalamus52
Kidney68.35
Leukemia_chronicMyelogenousK-56211.95
Leukemia_promyelocytic-HL-6011.2
Leukemialymphoblastic(MOLT-4)10
Liver38.35
Lung185.05
Lymphnode30.9
Lymphoma_burkitts(Daudi)17.3
Lymphoma_burkitts(Raji)11.2
MedullaOblongata92.95
OccipitalLobe45.65
OlfactoryBulb31.4
Ovary26.7
Pancreas22.55
PancreaticIslet41.8
ParietalLobe67.1
Pituitary189
Placenta31.95
Pons73.15
PrefrontalCortex200.55
Prostate70.4
Salivarygland19.3
SkeletalMuscle2101.1
Skin34.05
SmoothMuscle48.9
Spinalcord31.1
SubthalamicNucleus108.65
SuperiorCervicalGanglion20.3
TemporalLobe150.85
Testis82.4
TestisGermCell22.15
TestisIntersitial28.1
TestisLeydigCell25.9
TestisSeminiferousTubule26.85
Thalamus68.05
Thymus103.15
Thyroid341.8
Tongue1047.2
Tonsil12.8
Trachea36.9
TrigeminalGanglion34.6
Uterus43.75
UterusCorpus25.3
WholeBlood13.65
Wholebrain357.5
colon35.85
pineal_day25.92
pineal_night67.54
retina189.175
small_intestine55.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_9082_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala1.9 ± 0.92
Basal Forebrain1.3 ± 0.26
Basal Part of Pons1.5 ± 0.76
Cerebellar Cortex1.63 ± 0.74
Cerebellar Nuclei1.78 ± 0.71
Claustrum2.3 ± 1.01
Epithalamus1.09 ± 0.75
Frontal Lobe1.56 ± 0.77
Globus Pallidus2.08 ± 0.67
Hypothalamus1.54 ± 0.69
Insula1.24 ± 0.62
Limbic Lobe1.65 ± 0.81
Mesencephalon1.68 ± 0.74
Myelencephalon1.62 ± 0.73
Occipital Lobe1.62 ± 0.72
Parietal Lobe1.5 ± 0.88
Pontine Tegmentum1.53 ± 0.7
Striatum1.51 ± 0.67
Subthalamus1.67 ± 0.74
Temporal Lobe1.46 ± 0.64
Thalamus1.49 ± 0.71
White Matter1.81 ± 0.44
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cox7a1CBCerebellum0.38
0.65
Cox7a1CTXCerebral cortex0.46
0.69
Cox7a1HIPHippocampal region0.24
0.27
Cox7a1HPFHippocampal formation0.21
0.22
Cox7a1HYHypothalamus0.04
0.14
Cox7a1LSXLateral septal complex0
0
Cox7a1MBMidbrain0.09
0.22
Cox7a1MYMedulla0.59
0.71
Cox7a1OLFOlfactory bulb1.03
1.51
Cox7a1PPons0.12
0.3
Cox7a1PALPallidum0.11
0.15
Cox7a1RHPRetrohippocampal region0.14
0.12
Cox7a1sAMYStriatum-like amygdalar nuclei0.15
0.17
Cox7a1STRStriatum0.14
0.19
Cox7a1STRdStriatum dorsal region0.17
0.28
Cox7a1STRvStriatum ventral region0.11
0.1
Cox7a1THThalamus0.16
0.83
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
CX7A1_HUMAN_32 13 32 44 LFQEDNDIPLYLK PRIDE
CX7A1_HUMAN_45 10 45 54 GGIVDNILYR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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