AutismKB 2.0

Annotation Detail for COX7B


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Basic Information Top
Gene Symbol:COX7B ( - )
Gene Full Name: cytochrome c oxidase subunit VIIb
Band: Xq21.1
Quick LinksEntrez ID:1349; OMIM: 603792; Uniprot ID:COX7B_HUMAN; ENSEMBL ID: ENSG00000131174; HGNC ID: 2291
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst2 / 6231932
fetus55 / 56401297
neonate3 / 3109796
infant1 / 2362042
juvenile5 / 5555689
adult218 / 1939121112
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor4 / 12794312
bladder carcinoma4 / 17475228
breast (mammary gland) tumor7 / 9417874
cervical tumor1 / 3436629
chondrosarcoma4 / 8282348
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor18 / 119369150
germ cell tumor14 / 26384553
glioma12 / 106883112
head and neck tumor3 / 13630222
kidney tumor5 / 6895972
leukemia12 / 95842125
liver tumor12 / 96359124
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal302 / 336030789
ovarian tumor3 / 7668239
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer54 / 102680525
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor7 / 12519155
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland4 / 33197120
ascites5 / 40015124
bladder4 / 29757134
blood19 / 123478153
bone2 / 7165527
bone marrow8 / 48801163
brain42 / 110098938
cervix1 / 4817120
connective tissue3 / 14925520
ear7 / 16212431
embryonic tissue9 / 21572241
esophagus0 / 202090 
eye11 / 21105452
heart30 / 89626334
intestine17 / 23447272
kidney11 / 21177751
larynx0 / 241450 
liver29 / 207743139
lung11 / 33697432
lymph0 / 442700 
lymph node3 / 9161032
mammary gland9 / 15327158
mouth1 / 6705214
muscle37 / 107715343
nerve0 / 157680 
ovary4 / 10205139
pancreas6 / 21481227
parathyroid12 / 20539584
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta15 / 28082553
prostate57 / 189345301
salivary gland1 / 2015549
skin5 / 21057423
spleen4 / 5395274
stomach17 / 96619175
testis17 / 33044251
thymus3 / 8113136
thyroid2 / 4747342
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord3 / 13680219
uterus11 / 23287847
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202110_at
Cell line Expression level Expression bar
721_B_lymphoblasts2687.75
Adipocyte806.1
AdrenalCortex226.7
Adrenalgland282.55
Amygdala754.55
Appendix253.95
AtrioventricularNode102.05
BDCA4+_DentriticCells859.1
Bonemarrow283.45
BronchialEpithelialCells1438.6
CD105+_Endothelial1236.95
CD14+_Monocytes910.4
CD19+_BCells(neg._sel.)670.6
CD33+_Myeloid936.2
CD34+924.9
CD4+_Tcells419.3
CD56+_NKCells732.1
CD71+_EarlyErythroid1579.1
CD8+_Tcells387.8
CardiacMyocytes601.35
Caudatenucleus489.45
Cerebellum254.75
CerebellumPeduncles616
CiliaryGanglion113.7
CingulateCortex526.9
Colorectaladenocarcinoma407.3
DorsalRootGanglion205.9
FetalThyroid640.7
Fetalbrain367.45
Fetalliver407.05
Fetallung662.05
GlobusPallidus266.1
Heart642.2
Hypothalamus1123.3
Kidney640.5
Leukemia_chronicMyelogenousK-5621799.15
Leukemia_promyelocytic-HL-601647.25
Leukemialymphoblastic(MOLT-4)889.65
Liver224.2
Lung254.05
Lymphnode348.9
Lymphoma_burkitts(Daudi)1450.95
Lymphoma_burkitts(Raji)736.45
MedullaOblongata442.25
OccipitalLobe564.25
OlfactoryBulb300.5
Ovary206
Pancreas378.2
PancreaticIslet566.6
ParietalLobe487.3
Pituitary478.55
Placenta335.5
Pons335.4
PrefrontalCortex648.15
Prostate382.05
Salivarygland688.65
SkeletalMuscle763.05
Skin214.5
SmoothMuscle1133.9
Spinalcord511.75
SubthalamicNucleus466.2
SuperiorCervicalGanglion120.95
TemporalLobe508.6
Testis75.05
TestisGermCell164
TestisIntersitial50.85
TestisLeydigCell107.05
TestisSeminiferousTubule96.45
Thalamus1216.4
Thymus359.6
Thyroid724.85
Tongue977.45
Tonsil489.35
Trachea286
TrigeminalGanglion135.95
Uterus277.75
UterusCorpus245.9
WholeBlood648.95
Wholebrain784.6
colon1163.45
pineal_day985.96
pineal_night1003.38
retina612.45
small_intestine1111.35
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P159650
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala11.48 ± 0.28
Basal Forebrain11.35 ± 0.24
Basal Part of Pons11.81 ± 0.18
Cerebellar Cortex11.53 ± 0.27
Cerebellar Nuclei12.1 ± 0.24
Claustrum11.16 ± 0.48
Epithalamus11.42 ± 0.18
Frontal Lobe11.81 ± 0.29
Globus Pallidus11.61 ± 0.37
Hypothalamus11.69 ± 0.21
Insula11.69 ± 0.32
Limbic Lobe11.35 ± 0.56
Mesencephalon11.54 ± 0.47
Myelencephalon11.5 ± 0.44
Occipital Lobe11.07 ± 0.45
Parietal Lobe11.64 ± 0.39
Pontine Tegmentum11.65 ± 0.37
Striatum11.25 ± 0.32
Subthalamus12.1 ± 0.11
Temporal Lobe11.68 ± 0.33
Thalamus11.65 ± 0.26
White Matter10.4 ± 0.42
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cox7bCBCerebellum32.8
50
Cox7bCTXCerebral cortex50
50
Cox7bHIPHippocampal region50
50
Cox7bHPFHippocampal formation50
50
Cox7bHYHypothalamus50
50
Cox7bLSXLateral septal complex50
50
Cox7bMBMidbrain50
50
Cox7bMYMedulla50
50
Cox7bOLFOlfactory bulb50
50
Cox7bPPons50
50
Cox7bPALPallidum50
50
Cox7bRHPRetrohippocampal region50
50
Cox7bsAMYStriatum-like amygdalar nuclei50
50
Cox7bSTRStriatum50
50
Cox7bSTRdStriatum dorsal region50
50
Cox7bSTRvStriatum ventral region50
50
Cox7bTHThalamus50
50
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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