AutismKB 2.0

Annotation Detail for CP


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Basic Information Top
Gene Symbol:CP ( CP-2 )
Gene Full Name: ceruloplasmin (ferroxidase)
Band: 3q24-q25.1
Quick LinksEntrez ID:1356; OMIM: 117700; Uniprot ID:CERU_HUMAN; ENSEMBL ID: ENSG00000047457; HGNC ID: 2295
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus9 / 56401215
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult184 / 193912194
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor20 / 94178212
cervical tumor1 / 3436629
chondrosarcoma2 / 8282324
colorectal tumor0 / 1142460 
esophageal tumor1 / 1729057
gastrointestinal tumor0 / 1193690 
germ cell tumor8 / 26384530
glioma6 / 10688356
head and neck tumor60 / 136302440
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor20 / 96359207
lung tumor1 / 1031279
lymphoma1 / 7175513
non-neoplasia15 / 97250154
normal286 / 336030785
ovarian tumor23 / 76682299
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor30 / 90257332
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood1 / 1234788
bone1 / 7165513
bone marrow1 / 4880120
brain45 / 110098940
cervix5 / 48171103
connective tissue16 / 149255107
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus1 / 2020949
eye52 / 211054246
heart0 / 896260 
intestine2 / 2344728
kidney22 / 211777103
larynx0 / 241450 
liver156 / 207743750
lung30 / 33697489
lymph0 / 442700 
lymph node1 / 9161010
mammary gland23 / 153271150
mouth61 / 67052909
muscle3 / 10771527
nerve0 / 157680 
ovary25 / 102051244
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta6 / 28082521
prostate6 / 18934531
salivary gland0 / 201550 
skin0 / 2105740 
spleen3 / 5395255
stomach2 / 9661920
testis10 / 33044230
thymus2 / 8113124
thyroid0 / 474730 
tonsil0 / 169990 
trachea87 / 524131659
umbilical cord0 / 136800 
uterus36 / 232878154
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204846_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.65
Adipocyte8.1
AdrenalCortex9.5
Adrenalgland7.65
Amygdala8.05
Appendix9.55
AtrioventricularNode11.1
BDCA4+_DentriticCells8.1
Bonemarrow9.15
BronchialEpithelialCells7.85
CD105+_Endothelial38.6
CD14+_Monocytes8.5
CD19+_BCells(neg._sel.)8.4
CD33+_Myeloid10.2
CD34+9.35
CD4+_Tcells8.75
CD56+_NKCells9.25
CD71+_EarlyErythroid7.65
CD8+_Tcells6.95
CardiacMyocytes11.55
Caudatenucleus7.45
Cerebellum6.65
CerebellumPeduncles9.75
CiliaryGanglion12.25
CingulateCortex8.45
Colorectaladenocarcinoma7.95
DorsalRootGanglion8.9
FetalThyroid8.3
Fetalbrain7.9
Fetalliver79.9
Fetallung18.2
GlobusPallidus7.35
Heart11.15
Hypothalamus11.4
Kidney6.85
Leukemia_chronicMyelogenousK-5627.35
Leukemia_promyelocytic-HL-607.2
Leukemialymphoblastic(MOLT-4)6.15
Liver14.55
Lung8.6
Lymphnode9.55
Lymphoma_burkitts(Daudi)10.35
Lymphoma_burkitts(Raji)11.7
MedullaOblongata7.45
OccipitalLobe7.15
OlfactoryBulb7.1
Ovary5.65
Pancreas7.1
PancreaticIslet22.55
ParietalLobe10.8
Pituitary28.75
Placenta7.9
Pons8.4
PrefrontalCortex9.95
Prostate9.35
Salivarygland9.45
SkeletalMuscle10.75
Skin7.75
SmoothMuscle9
Spinalcord8.85
SubthalamicNucleus8.55
SuperiorCervicalGanglion18.3
TemporalLobe7.85
Testis6.85
TestisGermCell6.4
TestisIntersitial7.3
TestisLeydigCell8.3
TestisSeminiferousTubule7.05
Thalamus8.55
Thymus5.9
Thyroid9.4
Tongue10.85
Tonsil10.15
Trachea32.15
TrigeminalGanglion13.1
Uterus6.75
UterusCorpus7.75
WholeBlood8.55
Wholebrain6.25
colon8.05
pineal_day14.04
pineal_night24.04
retina29.75
small_intestine7.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P40817
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.15 ± 0.56
Basal Forebrain6.1 ± 0.23
Basal Part of Pons6.31 ± 0.26
Cerebellar Cortex6.29 ± 0.3
Cerebellar Nuclei6.71 ± 0.28
Claustrum6.06 ± 0.71
Epithalamus6.72 ± 0.17
Frontal Lobe6.31 ± 0.43
Globus Pallidus6.64 ± 0.3
Hypothalamus6.55 ± 0.42
Insula6.31 ± 0.37
Limbic Lobe6.19 ± 0.5
Mesencephalon6.37 ± 0.49
Myelencephalon6.28 ± 0.41
Occipital Lobe6.3 ± 0.36
Parietal Lobe6.28 ± 0.31
Pontine Tegmentum6.35 ± 0.48
Striatum5.81 ± 0.39
Subthalamus6.86 ± 0.16
Temporal Lobe6.43 ± 0.44
Thalamus6.27 ± 0.3
White Matter6.68 ± 0.19
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00024005 33 145 177 ADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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