Annotation Detail for TMEM139
Basic Information Top
| Gene Symbol: | TMEM139 ( FLJ90586 ) |
|---|---|
| Gene Full Name: | transmembrane protein 139 |
| Band: | 7q34 |
| Quick Links | Entrez ID:135932; OMIM: NA; Uniprot ID:TM139_HUMAN; ENSEMBL ID: ENSG00000178826; HGNC ID: 22058 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.17558
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 11 / 564012 | 19 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 49 / 1939121 | 25 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 2 / 34366 | 58 |  |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 1 / 263845 | 3 |  |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 75 / 3360307 | 22 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 9 / 1100989 | 8 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 2 / 89626 | 22 | |
| intestine | 10 / 234472 | 42 | |
| kidney | 20 / 211777 | 94 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 4 / 336974 | 11 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 22 / 280825 | 78 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 4 / 330442 | 12 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P42909
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.11 ± 1.22 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.95 ± 0.35 | |
| Basal Part of Pons | 2.28 ± 0.93 | |
| Cerebellar Cortex | 1.72 ± 0.76 | |
| Cerebellar Nuclei | 3.06 ± 1.04 | |
| Claustrum | 2.37 ± 0.67 | |
| Epithalamus | 1.7 ± 0.54 | |
| Frontal Lobe | 1.94 ± 1 | |
| Globus Pallidus | 4.1 ± 0.5 | |
| Hypothalamus | 2.29 ± 1.87 | |
| Insula | 1.37 ± 0.51 | |
| Limbic Lobe | 1.75 ± 0.78 | |
| Mesencephalon | 2.15 ± 1 | |
| Myelencephalon | 1.97 ± 0.94 | |
| Occipital Lobe | 1.88 ± 0.86 | |
| Parietal Lobe | 1.97 ± 0.94 | |
| Pontine Tegmentum | 2.01 ± 0.76 | |
| Striatum | 1.89 ± 0.68 | |
| Subthalamus | 2.2 ± 0.19 | |
| Temporal Lobe | 1.71 ± 0.81 | |
| Thalamus | 1.97 ± 0.74 | |
| White Matter | 5.17 ± 0.18 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tmem139 | CB | Cerebellum | 4.89 | |
| 5.32 | | |||
| Tmem139 | CTX | Cerebral cortex | 2.69 | |
| 2.77 | | |||
| Tmem139 | HIP | Hippocampal region | 2.45 | |
| 2.5 | | |||
| Tmem139 | HPF | Hippocampal formation | 2.01 | |
| 1.89 | | |||
| Tmem139 | HY | Hypothalamus | 1.11 | |
| 2.75 | | |||
| Tmem139 | LSX | Lateral septal complex | 0.03 | |
| 0 | | |||
| Tmem139 | MB | Midbrain | 0.46 | |
| 0.63 | | |||
| Tmem139 | MY | Medulla | 2.39 | |
| 2.81 | | |||
| Tmem139 | OLF | Olfactory bulb | 6.58 | |
| 4.72 | | |||
| Tmem139 | P | Pons | 1.19 | |
| 1.47 | | |||
| Tmem139 | PAL | Pallidum | 0.3 | |
| 0.24 | | |||
| Tmem139 | RHP | Retrohippocampal region | 1.17 | |
| 0.91 | | |||
| Tmem139 | sAMY | Striatum-like amygdalar nuclei | 1.53 | |
| 1.25 | | |||
| Tmem139 | STR | Striatum | 0.92 | |
| 0.66 | | |||
| Tmem139 | STRd | Striatum dorsal region | 0.87 | |
| 0.65 | | |||
| Tmem139 | STRv | Striatum ventral region | 1.35 | |
| 0.81 | | |||
| Tmem139 | TH | Thalamus | 2.92 | |
| 3.99 | |