Annotation Detail for FAM69B
Basic Information Top
| Gene Symbol: | FAM69B ( C9orf136,MGC20262,pp6977 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 69, member B |
| Band: | 9q34.3 |
| Quick Links | Entrez ID:138311; OMIM: NA; Uniprot ID:FA69B_HUMAN; ENSEMBL ID: ENSG00000165716; HGNC ID: 28290 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.495480
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 60 / 564012 | 106 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 44 / 1939121 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 19 / 106883 | 177 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 125 / 3360307 | 37 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 8 / 125680 | 63 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 38 / 1100989 | 34 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 13 / 89626 | 145 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 13 / 211777 | 61 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 26 / 336974 | 77 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 14 / 214812 | 65 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 13 / 280825 | 46 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_11972_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.86 ± 0.55 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.49 ± 0.68 | |
| Basal Part of Pons | 4.12 ± 0.61 | |
| Cerebellar Cortex | 4.12 ± 0.47 | |
| Cerebellar Nuclei | 4.06 ± 0.86 | |
| Claustrum | 3.78 ± 0.72 | |
| Epithalamus | 3.91 ± 0.33 | |
| Frontal Lobe | 4.11 ± 0.56 | |
| Globus Pallidus | 3.75 ± 0.57 | |
| Hypothalamus | 3.79 ± 0.6 | |
| Insula | 4.06 ± 0.43 | |
| Limbic Lobe | 4 ± 0.55 | |
| Mesencephalon | 3.88 ± 0.56 | |
| Myelencephalon | 3.96 ± 0.59 | |
| Occipital Lobe | 3.73 ± 0.52 | |
| Parietal Lobe | 3.97 ± 0.48 | |
| Pontine Tegmentum | 3.85 ± 0.64 | |
| Striatum | 3.6 ± 0.58 | |
| Subthalamus | 4.18 ± 0.26 | |
| Temporal Lobe | 4.04 ± 0.59 | |
| Thalamus | 4.05 ± 0.51 | |
| White Matter | 2.16 ± 0.49 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| B230317C12Rik | CB | Cerebellum | 23.29 | |
| 99.2 | | |||
| B230317C12Rik | CTX | Cerebral cortex | 51.4 | |
| 43.97 | | |||
| B230317C12Rik | HIP | Hippocampal region | 33.58 | |
| 45.19 | | |||
| B230317C12Rik | HPF | Hippocampal formation | 39.8 | |
| 44.94 | | |||
| B230317C12Rik | HY | Hypothalamus | 21.55 | |
| 19.82 | | |||
| B230317C12Rik | LSX | Lateral septal complex | 24.43 | |
| 18.89 | | |||
| B230317C12Rik | MB | Midbrain | 32.69 | |
| 35.37 | | |||
| B230317C12Rik | MY | Medulla | 38.34 | |
| 55.33 | | |||
| B230317C12Rik | OLF | Olfactory bulb | 33.58 | |
| 29.99 | | |||
| B230317C12Rik | P | Pons | 34.73 | |
| 44.77 | | |||
| B230317C12Rik | PAL | Pallidum | 31.41 | |
| 35.68 | | |||
| B230317C12Rik | RHP | Retrohippocampal region | 48.75 | |
| 44.48 | | |||
| B230317C12Rik | sAMY | Striatum-like amygdalar nuclei | 24.43 | |
| 20.98 | | |||
| B230317C12Rik | STR | Striatum | 15.09 | |
| 12.67 | | |||
| B230317C12Rik | STRd | Striatum dorsal region | 13.33 | |
| 11.46 | | |||
| B230317C12Rik | STRv | Striatum ventral region | 13.57 | |
| 10.98 | | |||
| B230317C12Rik | TH | Thalamus | 40.99 | |
| 43.02 | |