AutismKB 2.0

Annotation Detail for TAF1L


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Basic Information Top
Gene Symbol:TAF1L ( MGC134910,TAF2A2 )
Gene Full Name: TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like
Band: 9p21.1
Quick LinksEntrez ID:138474; OMIM: 607798; Uniprot ID:TAF1L_HUMAN; ENSEMBL ID: ENSG00000122728; HGNC ID: 18056
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus1 / 5640121
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult5 / 19391212
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor1 / 2638453
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal3 / 33603070 
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain1 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine3 / 23447212
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: Primary tumors (U95A)
  • Affymatrix Probe ID: 112_g_at
Cell line Expression level Expression bar
Pr1T8.844
Pr4T11.803
Pr5T9.985
Pr7T10.549
Pr1N11.332
Pr5N10.439
Pr6T13.693
Pr3N10.523
Pr3T11.389
Pr4N10.249
Pr2N11.557
Pr8N11.571
Pr8T11.935
Pr9N11.001
Pr10N11.438
Pr10T11.617
Pr9T9.716
Pr11T15.179
Pr12T11.493
Pr13AT11.794
Pr13BT11.231
Pr21T11.655
Pr22T11.83
Pr30T14.377
Pr23T12.629
Pr19T11.814
Pr26T11.532
Pr31T11.974
Pr16T11.797
Pr17T36.522
Pr24T10.699
Pr27T11.446
Pr29T16.229
OVR10210.951
HUOVR10.188
G213.663
G312.308
G511.528
G611.693
G811.282
G911.548
CO7T12.351
CO8T10.648
CO15T13.203
CO27T12.504
CO30T13.391
CO32T11.97
CO40T11.68
CO52N14.384
CO62N13.486
K110.426
K210.564
K39.643
K411.34
K14N13.664
K1611.831
K1713.748
K1911.432
K2011.351
K2211.015
CO9T11.418
CO20T13.087
CO24T12.668
CO36N13.211
K1810.575
P1N10.136
P2N12.194
P5N12.695
P810.698
P118.561
P1711.667
K2112.214
K25N12.86
K28N14.108
CO42T12.412
P228.713
P13N10.575
LU11T11.65
LU16T12.343
LU7T11.119
LU8T10.956
LU12T11.738
LU13T12.39
LU5T12.493
LU6T13.515
LU14T12.119
LU17T12.717
LU50N10.135
LU52N12.231
LU18T12.77
LU55N12.208
LU3N12.674
P16B14.114
P2311.246
OVR1610.477
OVR1910.317
OVR2710.783
OVR2810.283
OVR278E12.07
OVR211.432
OVR510.533
OVR811.919
OVR1111.55
OVR1211.519
OVR1310.629
OVR2212.161
OVR2612.669
OVR1013.186
OVR278S12.729
OVR111.726
LU19T11.932
LU20T11.834
LU24T12.004
LU25T12.957
LU31T15.023
LU34T12.565
LU39T9.883
CO14T13.812
CO21T15.143
CO23T16.661
CO41N11.257
LU40T13.365
LU41T10.982
LU44T12.278
LU46T20.115
LU49T11.788
L5N12.714
LU42T12.206
LU30T13.793
LU43T17.155
CO5T12.55
CO44T11.314
CO49T12.94
CO51T12.431
CO56T11.732
CO61T11.649
LU26T13.363
LU33T15.554
LU36T11.511
CO43T14.655
G1812.978
G4610.987
L11T13.743
L13N12.673
L30T13.092
L31T12.949
L32T14.122
L34T13.79
L35T14.212
B1N14.492
B5N11.732
B8T11.968
B10T11.735
B14T13.365
B16T11.645
B17T12.056
B1NR12.995
B20T14.708
B51NR13.417
B6T16.674
B15T16.281
B21T21.72
B29T12.202
B31T13.807
B32T14.111
B24T11.774
B46T11.566
B34T12.247
B36T12.129
B37T12.936
B38T12.349
B39T10.683
X10211.877
X116_0212.381
G28010.315
X4610.732
X5810.894
G18612.506
G29611.654
L38T11.696
L31T.211.642
L26N12.878
N257ANTR12.225
N285BODY11.203
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P419850
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.23 ± 0.5
Basal Forebrain6.01 ± 0.23
Basal Part of Pons5.98 ± 0.3
Cerebellar Cortex6.09 ± 0.32
Cerebellar Nuclei5.87 ± 0.35
Claustrum6.56 ± 0.56
Epithalamus5.79 ± 0.12
Frontal Lobe5.85 ± 0.41
Globus Pallidus6.34 ± 0.31
Hypothalamus5.85 ± 0.4
Insula5.99 ± 0.21
Limbic Lobe6.09 ± 0.39
Mesencephalon6.03 ± 0.47
Myelencephalon6.03 ± 0.4
Occipital Lobe6.21 ± 0.32
Parietal Lobe6 ± 0.42
Pontine Tegmentum6.05 ± 0.44
Striatum6 ± 0.36
Subthalamus5.88 ± 0.04
Temporal Lobe5.98 ± 0.31
Thalamus6.01 ± 0.38
White Matter6.92 ± 0.27
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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