Annotation Detail for TAF1L


Gene Symbol: | TAF1L ( MGC134910,TAF2A2 ) |
---|---|
Gene Full Name: | TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like |
Band: | 9p21.1 |
Quick Links | Entrez ID:138474; OMIM: 607798; Uniprot ID:TAF1L_HUMAN; ENSEMBL ID: ENSG00000122728; HGNC ID: 18056 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591086
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
embryoid body | 0 / 70761 | 0 | |
blastocyst | 0 / 62319 | 0 | |
fetus | 1 / 564012 | 1 | ![]() |
neonate | 0 / 31097 | 0 | |
infant | 0 / 23620 | 0 | |
juvenile | 0 / 55556 | 0 | |
adult | 5 / 1939121 | 2 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adrenal tumor | 0 / 12794 | 0 | |
bladder carcinoma | 0 / 17475 | 0 | |
breast (mammary gland) tumor | 0 / 94178 | 0 | |
cervical tumor | 0 / 34366 | 0 | |
chondrosarcoma | 0 / 82823 | 0 | |
colorectal tumor | 2 / 114246 | 17 | ![]() |
esophageal tumor | 0 / 17290 | 0 | |
gastrointestinal tumor | 0 / 119369 | 0 | |
germ cell tumor | 1 / 263845 | 3 | ![]() |
glioma | 0 / 106883 | 0 | |
head and neck tumor | 1 / 136302 | 7 | ![]() |
kidney tumor | 0 / 68959 | 0 | |
leukemia | 0 / 95842 | 0 | |
liver tumor | 0 / 96359 | 0 | |
lung tumor | 0 / 103127 | 0 | |
lymphoma | 0 / 71755 | 0 | |
non-neoplasia | 0 / 97250 | 0 | |
normal | 3 / 3360307 | 0 | |
ovarian tumor | 0 / 76682 | 0 | |
pancreatic tumor | 0 / 104616 | 0 | |
primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
prostate cancer | 0 / 102680 | 0 | |
retinoblastoma | 0 / 46356 | 0 | |
skin tumor | 0 / 124949 | 0 | |
soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
uterine tumor | 0 / 90257 | 0 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 0 / 33197 | 0 | |
ascites | 0 / 40015 | 0 | |
bladder | 0 / 29757 | 0 | |
blood | 0 / 123478 | 0 | |
bone | 0 / 71655 | 0 | |
bone marrow | 0 / 48801 | 0 | |
brain | 1 / 1100989 | 0 | |
cervix | 0 / 48171 | 0 | |
connective tissue | 0 / 149255 | 0 | |
ear | 0 / 16212 | 0 | |
embryonic tissue | 0 / 215722 | 0 | |
esophagus | 0 / 20209 | 0 | |
eye | 0 / 211054 | 0 | |
heart | 0 / 89626 | 0 | |
intestine | 3 / 234472 | 12 | ![]() |
kidney | 0 / 211777 | 0 | |
larynx | 0 / 24145 | 0 | |
liver | 0 / 207743 | 0 | |
lung | 0 / 336974 | 0 | |
lymph | 0 / 44270 | 0 | |
lymph node | 0 / 91610 | 0 | |
mammary gland | 0 / 153271 | 0 | |
mouth | 0 / 67052 | 0 | |
muscle | 1 / 107715 | 9 | ![]() |
nerve | 0 / 15768 | 0 | |
ovary | 0 / 102051 | 0 | |
pancreas | 0 / 214812 | 0 | |
parathyroid | 0 / 20539 | 0 | |
pharynx | 0 / 41328 | 0 | |
pituitary gland | 0 / 16585 | 0 | |
placenta | 0 / 280825 | 0 | |
prostate | 0 / 189345 | 0 | |
salivary gland | 0 / 20155 | 0 | |
skin | 0 / 210574 | 0 | |
spleen | 0 / 53952 | 0 | |
stomach | 0 / 96619 | 0 | |
testis | 0 / 330442 | 0 | |
thymus | 0 / 81131 | 0 | |
thyroid | 1 / 47473 | 21 | ![]() |
tonsil | 0 / 16999 | 0 | |
trachea | 0 / 52413 | 0 | |
umbilical cord | 0 / 13680 | 0 | |
uterus | 0 / 232878 | 0 | |
vascular | 0 / 51780 | 0 |
- Microarray Platform: Primary tumors (U95A)
- Affymatrix Probe ID: 112_g_at
Cell line | Expression level | Expression bar |
---|---|---|
![]() | ||
Pr1T | 8.844 | ![]() |
Pr4T | 11.803 | ![]() |
Pr5T | 9.985 | ![]() |
Pr7T | 10.549 | ![]() |
Pr1N | 11.332 | ![]() |
Pr5N | 10.439 | ![]() |
Pr6T | 13.693 | ![]() |
Pr3N | 10.523 | ![]() |
Pr3T | 11.389 | ![]() |
Pr4N | 10.249 | ![]() |
Pr2N | 11.557 | ![]() |
Pr8N | 11.571 | ![]() |
Pr8T | 11.935 | ![]() |
Pr9N | 11.001 | ![]() |
Pr10N | 11.438 | ![]() |
Pr10T | 11.617 | ![]() |
Pr9T | 9.716 | ![]() |
Pr11T | 15.179 | ![]() |
Pr12T | 11.493 | ![]() |
Pr13AT | 11.794 | ![]() |
Pr13BT | 11.231 | ![]() |
Pr21T | 11.655 | ![]() |
Pr22T | 11.83 | ![]() |
Pr30T | 14.377 | ![]() |
Pr23T | 12.629 | ![]() |
Pr19T | 11.814 | ![]() |
Pr26T | 11.532 | ![]() |
Pr31T | 11.974 | ![]() |
Pr16T | 11.797 | ![]() |
Pr17T | 36.522 | ![]() |
Pr24T | 10.699 | ![]() |
Pr27T | 11.446 | ![]() |
Pr29T | 16.229 | ![]() |
OVR102 | 10.951 | ![]() |
HUOVR | 10.188 | ![]() |
G2 | 13.663 | ![]() |
G3 | 12.308 | ![]() |
G5 | 11.528 | ![]() |
G6 | 11.693 | ![]() |
G8 | 11.282 | ![]() |
G9 | 11.548 | ![]() |
CO7T | 12.351 | ![]() |
CO8T | 10.648 | ![]() |
CO15T | 13.203 | ![]() |
CO27T | 12.504 | ![]() |
CO30T | 13.391 | ![]() |
CO32T | 11.97 | ![]() |
CO40T | 11.68 | ![]() |
CO52N | 14.384 | ![]() |
CO62N | 13.486 | ![]() |
K1 | 10.426 | ![]() |
K2 | 10.564 | ![]() |
K3 | 9.643 | ![]() |
K4 | 11.34 | ![]() |
K14N | 13.664 | ![]() |
K16 | 11.831 | ![]() |
K17 | 13.748 | ![]() |
K19 | 11.432 | ![]() |
K20 | 11.351 | ![]() |
K22 | 11.015 | ![]() |
CO9T | 11.418 | ![]() |
CO20T | 13.087 | ![]() |
CO24T | 12.668 | ![]() |
CO36N | 13.211 | ![]() |
K18 | 10.575 | ![]() |
P1N | 10.136 | ![]() |
P2N | 12.194 | ![]() |
P5N | 12.695 | ![]() |
P8 | 10.698 | ![]() |
P11 | 8.561 | ![]() |
P17 | 11.667 | ![]() |
K21 | 12.214 | ![]() |
K25N | 12.86 | ![]() |
K28N | 14.108 | ![]() |
CO42T | 12.412 | ![]() |
P22 | 8.713 | ![]() |
P13N | 10.575 | ![]() |
LU11T | 11.65 | ![]() |
LU16T | 12.343 | ![]() |
LU7T | 11.119 | ![]() |
LU8T | 10.956 | ![]() |
LU12T | 11.738 | ![]() |
LU13T | 12.39 | ![]() |
LU5T | 12.493 | ![]() |
LU6T | 13.515 | ![]() |
LU14T | 12.119 | ![]() |
LU17T | 12.717 | ![]() |
LU50N | 10.135 | ![]() |
LU52N | 12.231 | ![]() |
LU18T | 12.77 | ![]() |
LU55N | 12.208 | ![]() |
LU3N | 12.674 | ![]() |
P16B | 14.114 | ![]() |
P23 | 11.246 | ![]() |
OVR16 | 10.477 | ![]() |
OVR19 | 10.317 | ![]() |
OVR27 | 10.783 | ![]() |
OVR28 | 10.283 | ![]() |
OVR278E | 12.07 | ![]() |
OVR2 | 11.432 | ![]() |
OVR5 | 10.533 | ![]() |
OVR8 | 11.919 | ![]() |
OVR11 | 11.55 | ![]() |
OVR12 | 11.519 | ![]() |
OVR13 | 10.629 | ![]() |
OVR22 | 12.161 | ![]() |
OVR26 | 12.669 | ![]() |
OVR10 | 13.186 | ![]() |
OVR278S | 12.729 | ![]() |
OVR1 | 11.726 | ![]() |
LU19T | 11.932 | ![]() |
LU20T | 11.834 | ![]() |
LU24T | 12.004 | ![]() |
LU25T | 12.957 | ![]() |
LU31T | 15.023 | ![]() |
LU34T | 12.565 | ![]() |
LU39T | 9.883 | ![]() |
CO14T | 13.812 | ![]() |
CO21T | 15.143 | ![]() |
CO23T | 16.661 | ![]() |
CO41N | 11.257 | ![]() |
LU40T | 13.365 | ![]() |
LU41T | 10.982 | ![]() |
LU44T | 12.278 | ![]() |
LU46T | 20.115 | ![]() |
LU49T | 11.788 | ![]() |
L5N | 12.714 | ![]() |
LU42T | 12.206 | ![]() |
LU30T | 13.793 | ![]() |
LU43T | 17.155 | ![]() |
CO5T | 12.55 | ![]() |
CO44T | 11.314 | ![]() |
CO49T | 12.94 | ![]() |
CO51T | 12.431 | ![]() |
CO56T | 11.732 | ![]() |
CO61T | 11.649 | ![]() |
LU26T | 13.363 | ![]() |
LU33T | 15.554 | ![]() |
LU36T | 11.511 | ![]() |
CO43T | 14.655 | ![]() |
G18 | 12.978 | ![]() |
G46 | 10.987 | ![]() |
L11T | 13.743 | ![]() |
L13N | 12.673 | ![]() |
L30T | 13.092 | ![]() |
L31T | 12.949 | ![]() |
L32T | 14.122 | ![]() |
L34T | 13.79 | ![]() |
L35T | 14.212 | ![]() |
B1N | 14.492 | ![]() |
B5N | 11.732 | ![]() |
B8T | 11.968 | ![]() |
B10T | 11.735 | ![]() |
B14T | 13.365 | ![]() |
B16T | 11.645 | ![]() |
B17T | 12.056 | ![]() |
B1NR | 12.995 | ![]() |
B20T | 14.708 | ![]() |
B51NR | 13.417 | ![]() |
B6T | 16.674 | ![]() |
B15T | 16.281 | ![]() |
B21T | 21.72 | ![]() |
B29T | 12.202 | ![]() |
B31T | 13.807 | ![]() |
B32T | 14.111 | ![]() |
B24T | 11.774 | ![]() |
B46T | 11.566 | ![]() |
B34T | 12.247 | ![]() |
B36T | 12.129 | ![]() |
B37T | 12.936 | ![]() |
B38T | 12.349 | ![]() |
B39T | 10.683 | ![]() |
X102 | 11.877 | ![]() |
X116_02 | 12.381 | ![]() |
G280 | 10.315 | ![]() |
X46 | 10.732 | ![]() |
X58 | 10.894 | ![]() |
G186 | 12.506 | ![]() |
G296 | 11.654 | ![]() |
L38T | 11.696 | ![]() |
L31T.2 | 11.642 | ![]() |
L26N | 12.878 | ![]() |
N257ANTR | 12.225 | ![]() |
N285BODY | 11.203 | ![]() |
- Probe name: A_23_P419850
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 6.23 ± 0.5 | ![]() ![]() ![]() |
Basal Forebrain | 6.01 ± 0.23 | ![]() ![]() ![]() |
Basal Part of Pons | 5.98 ± 0.3 | ![]() ![]() ![]() |
Cerebellar Cortex | 6.09 ± 0.32 | ![]() ![]() ![]() |
Cerebellar Nuclei | 5.87 ± 0.35 | ![]() ![]() ![]() |
Claustrum | 6.56 ± 0.56 | ![]() ![]() ![]() |
Epithalamus | 5.79 ± 0.12 | ![]() ![]() ![]() |
Frontal Lobe | 5.85 ± 0.41 | ![]() ![]() ![]() |
Globus Pallidus | 6.34 ± 0.31 | ![]() ![]() ![]() |
Hypothalamus | 5.85 ± 0.4 | ![]() ![]() ![]() |
Insula | 5.99 ± 0.21 | ![]() ![]() ![]() |
Limbic Lobe | 6.09 ± 0.39 | ![]() ![]() ![]() |
Mesencephalon | 6.03 ± 0.47 | ![]() ![]() ![]() |
Myelencephalon | 6.03 ± 0.4 | ![]() ![]() ![]() |
Occipital Lobe | 6.21 ± 0.32 | ![]() ![]() ![]() |
Parietal Lobe | 6 ± 0.42 | ![]() ![]() ![]() |
Pontine Tegmentum | 6.05 ± 0.44 | ![]() ![]() ![]() |
Striatum | 6 ± 0.36 | ![]() ![]() ![]() |
Subthalamus | 5.88 ± 0.04 | ![]() ![]() ![]() |
Temporal Lobe | 5.98 ± 0.31 | ![]() ![]() ![]() |
Thalamus | 6.01 ± 0.38 | ![]() ![]() ![]() |
White Matter | 6.92 ± 0.27 | ![]() ![]() ![]() |