AutismKB 2.0

Annotation Detail for S100A16


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Basic Information Top
Gene Symbol:S100A16 ( DT1P1A7,MGC17528,S100F )
Gene Full Name: S100 calcium binding protein A16
Band: 1q21.3
Quick LinksEntrez ID:140576; OMIM: NA; Uniprot ID:S10AG_HUMAN; ENSEMBL ID: ENSG00000188643; HGNC ID: 20441
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body17 / 70761240
blastocyst1 / 6231916
fetus21 / 56401237
neonate1 / 3109732
infant0 / 236200 
juvenile2 / 5555635
adult229 / 1939121118
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor12 / 94178127
cervical tumor12 / 34366349
chondrosarcoma25 / 82823301
colorectal tumor36 / 114246315
esophageal tumor5 / 17290289
gastrointestinal tumor10 / 11936983
germ cell tumor17 / 26384564
glioma22 / 106883205
head and neck tumor25 / 136302183
kidney tumor3 / 6895943
leukemia2 / 9584220
liver tumor14 / 96359145
lung tumor31 / 103127300
lymphoma0 / 717550 
non-neoplasia4 / 9725041
normal201 / 336030759
ovarian tumor23 / 76682299
pancreatic tumor20 / 104616191
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer30 / 102680292
retinoblastoma0 / 463560 
skin tumor55 / 124949440
soft tissue/muscle tissue tumor16 / 125191127
uterine tumor7 / 9025777
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites7 / 40015174
bladder2 / 2975767
blood1 / 1234788
bone22 / 71655307
bone marrow2 / 4880140
brain42 / 110098938
cervix13 / 48171269
connective tissue18 / 149255120
ear0 / 162120 
embryonic tissue20 / 21572292
esophagus5 / 20209247
eye24 / 211054113
heart7 / 8962678
intestine46 / 234472196
kidney9 / 21177742
larynx4 / 24145165
liver22 / 207743105
lung54 / 336974160
lymph0 / 442700 
lymph node0 / 916100 
mammary gland25 / 153271163
mouth3 / 6705244
muscle7 / 10771564
nerve2 / 15768126
ovary25 / 102051244
pancreas27 / 214812125
parathyroid1 / 2053948
pharynx17 / 41328411
pituitary gland0 / 165850 
placenta17 / 28082560
prostate37 / 189345195
salivary gland2 / 2015599
skin75 / 210574356
spleen1 / 5395218
stomach13 / 96619134
testis11 / 33044233
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord1 / 1368073
uterus14 / 23287860
vascular5 / 5178096
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P147918
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.19 ± 0.26
Basal Forebrain8.43 ± 0.16
Basal Part of Pons7.36 ± 0.24
Cerebellar Cortex7.71 ± 0.18
Cerebellar Nuclei8.04 ± 0.32
Claustrum7.63 ± 0.53
Epithalamus8.53 ± 0.19
Frontal Lobe8.1 ± 0.47
Globus Pallidus9.22 ± 0.28
Hypothalamus8.27 ± 0.34
Insula8.16 ± 0.36
Limbic Lobe7.94 ± 0.57
Mesencephalon8.31 ± 0.38
Myelencephalon8.2 ± 0.44
Occipital Lobe8.11 ± 0.42
Parietal Lobe8.01 ± 0.47
Pontine Tegmentum8.25 ± 0.29
Striatum8.59 ± 0.33
Subthalamus7.78 ± 0.59
Temporal Lobe8.04 ± 0.37
Thalamus8.39 ± 0.41
White Matter7.53 ± 0.44
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
S100a16CBCerebellum48.71
72.59
S100a16CTXCerebral cortex23.35
18.69
S100a16HIPHippocampal region35.03
38.23
S100a16HPFHippocampal formation35.73
35.5
S100a16HYHypothalamus52.94
44.37
S100a16LSXLateral septal complex56.97
51.81
S100a16MBMidbrain53.9
46.71
S100a16MYMedulla80.29
80.93
S100a16OLFOlfactory bulb53.5
47.34
S100a16PPons85.86
86.55
S100a16PALPallidum47.23
42.67
S100a16RHPRetrohippocampal region35.06
29.94
S100a16sAMYStriatum-like amygdalar nuclei36.71
30.05
S100a16STRStriatum44.03
38.69
S100a16STRdStriatum dorsal region44.61
41.32
S100a16STRvStriatum ventral region43.11
32.66
S100a16THThalamus43.52
36.48
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00061926 11 11 21 AVIVLVENFYK Peptide Atlas
S10AG_HUMAN_10 11 10 20 AVIVLVENFYK PRIDE
S10AG_HUMAN_35 9 35 43 SSFREMLQK PRIDE
S10AG_HUMAN_44 12 44 55 ELNHMLSDTGNR PRIDE
S10AG_HUMAN_44 13 44 56 ELNHMLSDTGNRK PRIDE
S10AG_HUMAN_45 12 45 56 ELNHMLSDTGNR PRIDE
S10AG_HUMAN_56 17 56 72 KAADKLIQNLDANHDGR PRIDE
S10AG_HUMAN_57 16 57 72 AADKLIQNLDANHDGR PRIDE
S10AG_HUMAN_61 12 61 72 LIQNLDANHDGR PRIDE
S10AG_HUMAN_73 19 73 91 ISFDEYWTLIGGITGPIAK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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