Annotation Detail for MACROD2
Basic Information Top
| Gene Symbol: | MACROD2 ( C20orf133 ) |
|---|---|
| Gene Full Name: | MACRO domain containing 2 |
| Band: | 20p12.1 |
| Quick Links | Entrez ID:140733; OMIM: 611567; Uniprot ID:MACD2_HUMAN; ENSEMBL ID: ENSG00000172264; HGNC ID: 16126 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.661576
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 5 / 564012 | 8 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 11 / 1939121 | 5 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 4 / 68959 | 58 |  |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 28 / 3360307 | 8 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 14 / 1100989 | 12 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 7 / 330442 | 21 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P22398
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.35 ± 0.18 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.21 ± 0.35 | |
| Basal Part of Pons | 9.32 ± 0.24 | |
| Cerebellar Cortex | 8.71 ± 0.11 | |
| Cerebellar Nuclei | 8.74 ± 0.26 | |
| Claustrum | 8.86 ± 0.31 | |
| Epithalamus | 8.53 ± 0.54 | |
| Frontal Lobe | 9.01 ± 0.33 | |
| Globus Pallidus | 8.51 ± 0.3 | |
| Hypothalamus | 8.91 ± 0.41 | |
| Insula | 9.2 ± 0.25 | |
| Limbic Lobe | 9.03 ± 0.39 | |
| Mesencephalon | 8.91 ± 0.45 | |
| Myelencephalon | 8.96 ± 0.36 | |
| Occipital Lobe | 8.6 ± 0.32 | |
| Parietal Lobe | 8.84 ± 0.29 | |
| Pontine Tegmentum | 8.88 ± 0.34 | |
| Striatum | 9.91 ± 0.3 | |
| Subthalamus | 9.08 ± 0.07 | |
| Temporal Lobe | 9.04 ± 0.31 | |
| Thalamus | 9.03 ± 0.39 | |
| White Matter | 8.06 ± 0.15 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2900006F19Rik | CB | Cerebellum | 16.86 | |
| 19.9 | | |||
| 2900006F19Rik | CTX | Cerebral cortex | 51.6 | |
| 37.68 | | |||
| 2900006F19Rik | HIP | Hippocampal region | 30.01 | |
| 31.7 | | |||
| 2900006F19Rik | HPF | Hippocampal formation | 37.69 | |
| 35.92 | | |||
| 2900006F19Rik | HY | Hypothalamus | 12.16 | |
| 9.41 | | |||
| 2900006F19Rik | LSX | Lateral septal complex | 19.28 | |
| 12.83 | | |||
| 2900006F19Rik | MB | Midbrain | 15.41 | |
| 13.55 | | |||
| 2900006F19Rik | MY | Medulla | 21.64 | |
| 21.3 | | |||
| 2900006F19Rik | OLF | Olfactory bulb | 51.01 | |
| 42.62 | | |||
| 2900006F19Rik | P | Pons | 18.82 | |
| 17.55 | | |||
| 2900006F19Rik | PAL | Pallidum | 17.48 | |
| 14.19 | | |||
| 2900006F19Rik | RHP | Retrohippocampal region | 54.63 | |
| 45.43 | | |||
| 2900006F19Rik | sAMY | Striatum-like amygdalar nuclei | 35.8 | |
| 25.64 | | |||
| 2900006F19Rik | STR | Striatum | 41.55 | |
| 28.42 | | |||
| 2900006F19Rik | STRd | Striatum dorsal region | 45.1 | |
| 31.14 | | |||
| 2900006F19Rik | STRv | Striatum ventral region | 43.36 | |
| 27.74 | | |||
| 2900006F19Rik | TH | Thalamus | 25.93 | |
| 19.71 | |