AutismKB 2.0

Annotation Detail for CRYGS


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Basic Information Top
Gene Symbol:CRYGS ( CRYG8 )
Gene Full Name: crystallin, gamma S
Band: 3q27.3
Quick LinksEntrez ID:1427; OMIM: 123730; Uniprot ID:CRBS_HUMAN; ENSEMBL ID: ENSG00000213139; HGNC ID: 2417
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus39 / 56401269
neonate2 / 3109764
infant0 / 236200 
juvenile0 / 555560 
adult161 / 193912183
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal211 / 336030762
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood2 / 12347816
bone1 / 7165513
bone marrow0 / 488010 
brain8 / 11009897
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye181 / 211054857
heart0 / 896260 
intestine0 / 2344720 
kidney1 / 2117774
larynx0 / 241450 
liver2 / 2077439
lung3 / 3369748
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate1 / 1893455
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis1 / 3304423
thymus2 / 8113124
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206451_at
Cell line Expression level Expression bar
721_B_lymphoblasts14.7
Adipocyte11.15
AdrenalCortex14.9
Adrenalgland11.15
Amygdala13.5
Appendix17
AtrioventricularNode15.35
BDCA4+_DentriticCells13.15
Bonemarrow13.6
BronchialEpithelialCells11.95
CD105+_Endothelial16.7
CD14+_Monocytes14
CD19+_BCells(neg._sel.)13.55
CD33+_Myeloid15.9
CD34+16.5
CD4+_Tcells13.75
CD56+_NKCells14.45
CD71+_EarlyErythroid13.35
CD8+_Tcells12.2
CardiacMyocytes19.1
Caudatenucleus11.65
Cerebellum10.55
CerebellumPeduncles15.15
CiliaryGanglion14.65
CingulateCortex13.2
Colorectaladenocarcinoma13.3
DorsalRootGanglion11.35
FetalThyroid12.7
Fetalbrain12.25
Fetalliver11.25
Fetallung9.1
GlobusPallidus9.6
Heart21.85
Hypothalamus13.4
Kidney11.5
Leukemia_chronicMyelogenousK-56211.45
Leukemia_promyelocytic-HL-6010.3
Leukemialymphoblastic(MOLT-4)10.2
Liver19.35
Lung13.5
Lymphnode10.1
Lymphoma_burkitts(Daudi)16.35
Lymphoma_burkitts(Raji)20.55
MedullaOblongata11.3
OccipitalLobe11.3
OlfactoryBulb8.85
Ovary9.25
Pancreas9.4
PancreaticIslet13.8
ParietalLobe14.05
Pituitary15.1
Placenta12.7
Pons13.75
PrefrontalCortex15.2
Prostate15
Salivarygland10.6
SkeletalMuscle21.25
Skin11.15
SmoothMuscle14
Spinalcord13.55
SubthalamicNucleus12.15
SuperiorCervicalGanglion21.45
TemporalLobe12.45
Testis18.15
TestisGermCell13.05
TestisIntersitial11.8
TestisLeydigCell17.05
TestisSeminiferousTubule12.55
Thalamus13.45
Thymus10.25
Thyroid16
Tongue15.25
Tonsil12.75
Trachea9.8
TrigeminalGanglion18.75
Uterus11.05
UterusCorpus12.3
WholeBlood13.5
Wholebrain10.8
colon13.85
pineal_day19.64
pineal_night24.08
retina18.375
small_intestine13.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P132738
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.07 ± 0.61
Basal Forebrain4.2 ± 0.11
Basal Part of Pons4.56 ± 0.4
Cerebellar Cortex4.98 ± 0.3
Cerebellar Nuclei4.25 ± 0.49
Claustrum3.95 ± 0.9
Epithalamus5.11 ± 0.35
Frontal Lobe4.41 ± 0.44
Globus Pallidus4.42 ± 0.46
Hypothalamus4.66 ± 0.49
Insula4.56 ± 0.51
Limbic Lobe4.35 ± 0.5
Mesencephalon4.42 ± 0.61
Myelencephalon4.34 ± 0.53
Occipital Lobe4.54 ± 0.55
Parietal Lobe4.48 ± 0.58
Pontine Tegmentum4.44 ± 0.56
Striatum3.76 ± 0.41
Subthalamus4.49 ± 0.23
Temporal Lobe4.46 ± 0.4
Thalamus4.35 ± 0.49
White Matter4.62 ± 0.31
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00434619 22 102 123 GDFSGQMYETTEDCPSIMEQFH Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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