Annotation Detail for CSNK1E
Basic Information Top
| Gene Symbol: | CSNK1E ( HCKIE,MGC10398 ) |
|---|---|
| Gene Full Name: | casein kinase 1, epsilon |
| Band: | 22q13.1 |
| Quick Links | Entrez ID:1454; OMIM: 600863; Uniprot ID:KC1E_HUMAN; ENSEMBL ID: ENSG00000213923; HGNC ID: 2453 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.474833
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 7 / 70761 | 98 |  |
| blastocyst | 7 / 62319 | 112 | |
| fetus | 66 / 564012 | 117 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 |  |
| juvenile | 3 / 55556 | 53 | |
| adult | 233 / 1939121 | 120 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 8 / 94178 | 84 | |
| cervical tumor | 6 / 34366 | 174 | |
| chondrosarcoma | 8 / 82823 | 96 | |
| colorectal tumor | 7 / 114246 | 61 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 13 / 119369 | 108 | |
| germ cell tumor | 13 / 263845 | 49 | |
| glioma | 27 / 106883 | 252 |  |
| head and neck tumor | 23 / 136302 | 168 | |
| kidney tumor | 7 / 68959 | 101 | |
| leukemia | 10 / 95842 | 104 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 13 / 103127 | 126 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 1 / 97250 | 10 |  |
| normal | 288 / 3360307 | 85 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 12 / 104616 | 114 | |
| primitive neuroectodermal tumor of the CNS | 46 / 125680 | 366 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 5 / 46356 | 107 | |
| skin tumor | 36 / 124949 | 288 | |
| soft tissue/muscle tissue tumor | 19 / 125191 | 151 | |
| uterine tumor | 10 / 90257 | 110 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 2 / 29757 | 67 | |
| blood | 9 / 123478 | 72 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 104 / 1100989 | 94 | |
| cervix | 19 / 48171 | 394 | |
| connective tissue | 8 / 149255 | 53 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 21 / 215722 | 97 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 21 / 211054 | 99 | |
| heart | 6 / 89626 | 66 | |
| intestine | 17 / 234472 | 72 | |
| kidney | 12 / 211777 | 56 | |
| larynx | 2 / 24145 | 82 | |
| liver | 8 / 207743 | 38 | |
| lung | 49 / 336974 | 145 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 14 / 153271 | 91 | |
| mouth | 15 / 67052 | 223 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 6 / 15768 | 380 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 28 / 214812 | 130 | |
| parathyroid | 5 / 20539 | 243 | |
| pharynx | 4 / 41328 | 96 | |
| pituitary gland | 5 / 16585 | 301 | |
| placenta | 37 / 280825 | 131 | |
| prostate | 14 / 189345 | 73 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 52 / 210574 | 246 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 7 / 96619 | 72 | |
| testis | 3 / 330442 | 9 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 4 / 47473 | 84 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 29 / 232878 | 124 | |
| vascular | 3 / 51780 | 57 | |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 202332_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 32.55 | |
| Adipocyte | 13.55 | |
| AdrenalCortex | 28.25 | |
| Adrenalgland | 15.9 | |
| Amygdala | 27.95 | |
| Appendix | 19.9 | |
| AtrioventricularNode | 13.75 | |
| BDCA4+_DentriticCells | 97.95 | |
| Bonemarrow | 11.15 | |
| BronchialEpithelialCells | 28.7 | |
| CD105+_Endothelial | 26.1 | |
| CD14+_Monocytes | 26.6 | |
| CD19+_BCells(neg._sel.) | 42.1 | |
| CD33+_Myeloid | 29.15 | |
| CD34+ | 61.8 | |
| CD4+_Tcells | 29.7 | |
| CD56+_NKCells | 33.7 | |
| CD71+_EarlyErythroid | 18.7 | |
| CD8+_Tcells | 26.6 | |
| CardiacMyocytes | 41.45 | |
| Caudatenucleus | 22.3 | |
| Cerebellum | 18.7 | |
| CerebellumPeduncles | 53.75 | |
| CiliaryGanglion | 17.4 | |
| CingulateCortex | 42.95 | |
| Colorectaladenocarcinoma | 25.4 | |
| DorsalRootGanglion | 18.95 | |
| FetalThyroid | 24.65 | |
| Fetalbrain | 55.35 | |
| Fetalliver | 15.15 | |
| Fetallung | 21.7 | |
| GlobusPallidus | 28.9 | |
| Heart | 31.75 | |
| Hypothalamus | 29.55 | |
| Kidney | 12.1 | |
| Leukemia_chronicMyelogenousK-562 | 17.75 | |
| Leukemia_promyelocytic-HL-60 | 32 | |
| Leukemialymphoblastic(MOLT-4) | 20.05 | |
| Liver | 15.6 | |
| Lung | 44.75 | |
| Lymphnode | 15.85 | |
| Lymphoma_burkitts(Daudi) | 30.3 | |
| Lymphoma_burkitts(Raji) | 66.45 | |
| MedullaOblongata | 33.9 | |
| OccipitalLobe | 33.95 | |
| OlfactoryBulb | 20.4 | |
| Ovary | 19.35 | |
| Pancreas | 13.3 | |
| PancreaticIslet | 27.05 | |
| ParietalLobe | 28.7 | |
| Pituitary | 17.45 | |
| Placenta | 28.4 | |
| Pons | 33.2 | |
| PrefrontalCortex | 105.9 | |
| Prostate | 31.85 | |
| Salivarygland | 13.2 | |
| SkeletalMuscle | 24.25 | |
| Skin | 18.95 | |
| SmoothMuscle | 44.75 | |
| Spinalcord | 25.15 | |
| SubthalamicNucleus | 28.8 | |
| SuperiorCervicalGanglion | 25.25 | |
| TemporalLobe | 33.65 | |
| Testis | 17.35 | |
| TestisGermCell | 21.9 | |
| TestisIntersitial | 14.55 | |
| TestisLeydigCell | 23.5 | |
| TestisSeminiferousTubule | 21.9 | |
| Thalamus | 27.35 | |
| Thymus | 19.7 | |
| Thyroid | 28 | |
| Tongue | 22.95 | |
| Tonsil | 20.2 | |
| Trachea | 15.45 | |
| TrigeminalGanglion | 24.6 | |
| Uterus | 27.65 | |
| UterusCorpus | 22.5 | |
| WholeBlood | 11.25 | |
| Wholebrain | 36.85 | |
| colon | 29.45 | |
| pineal_day | 156.96 | |
| pineal_night | 184 | |
| retina | 72.15 | |
| small_intestine | 29.2 | |
- Probe name: A_23_P29263
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.92 ± 0.21 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.92 ± 0.35 | |
| Basal Part of Pons | 6.25 ± 0.42 | |
| Cerebellar Cortex | 6.31 ± 0.42 | |
| Cerebellar Nuclei | 5.51 ± 0.62 | |
| Claustrum | 5.95 ± 0.52 | |
| Epithalamus | 6.27 ± 0.38 | |
| Frontal Lobe | 6.09 ± 0.53 | |
| Globus Pallidus | 5.68 ± 0.31 | |
| Hypothalamus | 6.07 ± 0.5 | |
| Insula | 6.19 ± 0.49 | |
| Limbic Lobe | 5.99 ± 0.39 | |
| Mesencephalon | 5.76 ± 0.54 | |
| Myelencephalon | 6 ± 0.53 | |
| Occipital Lobe | 5.91 ± 0.33 | |
| Parietal Lobe | 5.99 ± 0.37 | |
| Pontine Tegmentum | 5.93 ± 0.42 | |
| Striatum | 5.49 ± 0.37 | |
| Subthalamus | 6.12 ± 0.38 | |
| Temporal Lobe | 6.13 ± 0.42 | |
| Thalamus | 6.12 ± 0.42 | |
| White Matter | 6.24 ± 0.39 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Csnk1e | CB | Cerebellum | 12.2 | |
| 15.19 | | |||
| Csnk1e | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Csnk1e | HIP | Hippocampal region | 59.4 | |
| 84.86 | | |||
| Csnk1e | HPF | Hippocampal formation | 73.37 | |
| 90.22 | | |||
| Csnk1e | HY | Hypothalamus | 98.53 | |
| 88.18 | | |||
| Csnk1e | LSX | Lateral septal complex | 77.29 | |
| 67.27 | | |||
| Csnk1e | MB | Midbrain | 67.95 | |
| 71.29 | | |||
| Csnk1e | MY | Medulla | 34.6 | |
| 50.62 | | |||
| Csnk1e | OLF | Olfactory bulb | 84.23 | |
| 87.47 | | |||
| Csnk1e | P | Pons | 56.58 | |
| 75.38 | | |||
| Csnk1e | PAL | Pallidum | 65.1 | |
| 68.85 | | |||
| Csnk1e | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Csnk1e | sAMY | Striatum-like amygdalar nuclei | 76.12 | |
| 64.47 | | |||
| Csnk1e | STR | Striatum | 47.59 | |
| 40.97 | | |||
| Csnk1e | STRd | Striatum dorsal region | 36.99 | |
| 32.4 | | |||
| Csnk1e | STRv | Striatum ventral region | 51.97 | |
| 42.17 | | |||
| Csnk1e | TH | Thalamus | 95.48 | |
| 96.87 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00065545 | 13 | 128 | 140 | DVKPDNFLMGLGK | Peptide Atlas |